PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027329891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 270aa MW: 29116.8 Da PI: 6.1722 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.6 | 2.7e-16 | 182 | 217 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 C++Cg ++ Tp++Rrgp+g+++LCnaCGl+++ +g XP_027329891.1 182 CTHCGISSksTPMMRRGPSGPRSLCNACGLFWANRG 217 *****99999**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MEPAMYGHAQ PVNMPGQIAA GESDDGSGAD PAIDGHHHIH YETHALEDGG GGVGGGGVVV 60 EDVTSDAVYV SGGCGPEESS QLTLSFRGQV YVFDAVTPDK GSMEYPARCS QPQRAASLNR 120 FRQKRKERCF DKKVRYSVRQ EVALRMHRNK GQFTSSKKQD GANCWGTDQE SGQDDSQSET 180 SCTHCGISSK STPMMRRGPS GPRSLCNACG LFWANRGALR DLSKRNQEHS LAPVEQVDEG 240 NDSDSRTAVP AHNNLAAFSD NDNQALVADR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 3e-82 | GATA family protein |