PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329885.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 408aa MW: 44615.9 Da PI: 5.4894

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.2	1.1e-05	5	44	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +++++ +C+++ +lC +C + H+ H++ XP_027329885.1 5 CDFCGDQRSLVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 *****************************65677777765 PP
2	zf-B_box	22.1	3e-07	46	89	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 +C++++++++ C + + lC++C +H g H++++ XP_027329885.1 46 LVCERCNSQPAFVRCVEEKISLCQNCDWLGH-GtsptssaHKRQT 89 68*****************************.5588888888776 PP
3	CCT	61.2	3.5e-21	351	394	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktRkFeK++rY+sRKa+A+ R RvKGrFvk+ XP_027329885.1 351 RSNAVMRYKEKKKTRKFEKRVRYASRKARADVRRRVKGRFVKAG 394 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGYLCDFCGD QRSLVYCRSD AACLCLSCDR NVHSANALSR RHSRTLVCER CNSQPAFVRC 60 VEEKISLCQN CDWLGHGTSP TSSAHKRQTI NCYSGCPSAA EFSSIWSFFL DIPSMGEACE 120 QELGLMSINE NSNKNWVPPE GQNVSGSAQV TDLPSKDKSW VGTSSIPESG PLVLNQPSGP 180 ANESMPKLYC PGKKVSGLCD DDKLYDDFIM DEVDLELENY EELFGMAMSH SEELFENGGI 240 DSLFGTKDMS ASAGDSHCQG AVAAEGSSAG LVNAMQPACS NAASADSMLS TKTEPILCFT 300 ARQSQSNISF SGVTKDSAGD YQDCGASSML LMGEPPWCPP CPESSLQSAN RSNAVMRYKE 360 KKKTRKFEKR VRYASRKARA DVRRRVKGRF VKAGDVYDYD PLHQTRSY

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGYLCDFCGD QRSLVYCRSD AACLCLSCDR NVHSANALSR RHSRTLVCER CNSQPAFVRC  60
VEEKISLCQN CDWLGHGTSP TSSAHKRQTI NCYSGCPSAA EFSSIWSFFL DIPSMGEACE  120
QELGLMSINE NSNKNWVPPE GQNVSGSAQV TDLPSKDKSW VGTSSIPESG PLVLNQPSGP  180
ANESMPKLYC PGKKVSGLCD DDKLYDDFIM DEVDLELENY EELFGMAMSH SEELFENGGI  240
DSLFGTKDMS ASAGDSHCQG AVAAEGSSAG LVNAMQPACS NAASADSMLS TKTEPILCFT  300
ARQSQSNISF SGVTKDSAGD YQDCGASSML LMGEPPWCPP CPESSLQSAN RSNAVMRYKE  360
KKKTRKFEKR VRYASRKARA DVRRRVKGRF VKAGDVYDYD PLHQTRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-118	CO-like family protein