PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329849.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GeBP

Protein Properties

Length: 424aa MW: 46604.2 Da PI: 5.3618

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	123.6	9.4e-39	178	274	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 k+fqr+wseeDe+++L+G++df+++tg++p++ +af++f+kks++f++s++ql eKirrLKkKf++++ k k+g+ p+fsk+hdqk++elskk+ XP_027329849.1 178 KKFQRIWSEEDELAILKGMVDFTSNTGQDPFKYANAFHDFMKKSLHFDASSNQLKEKIRRLKKKFETNSGKGKNGNGPKFSKPHDQKSYELSKKV 272 68********************************************************************************************* PP DUF573 96 Wg 97 Wg XP_027329849.1 273 WG 274 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MVQKKQQRPS PLDDPPTASS SDSEEEEQRP SSEQRHAEDE EVASSEEEED SSEEDDDDDE 60 EHNPKPASQN PPPPPTNSLP KPSSSESETD SDSGSDSEPD PNPNPKVKPL ASKPMEQAQK 120 PKAHPSPTPS KSGSKRAAEN HAHVTGPKRA KKKATDFSGG GSDEEVEEDG KKSGELSKKF 180 QRIWSEEDEL AILKGMVDFT SNTGQDPFKY ANAFHDFMKK SLHFDASSNQ LKEKIRRLKK 240 KFETNSGKGK NGNGPKFSKP HDQKSYELSK KVWGNEQVET ANGAIEKEKS NGKAAKSPKK 300 EASGSRNVAT SGKKLKPETK PEPERISEVL TESGKMDIDP KPDGDTGLLL SEMFCYQNGG 360 GGVYRLNEDD AKRGLQLIGE SKRAELEAKW KKIRAAEMKL YADRALLVGE QTSLILEALQ 420 PSNH

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MVQKKQQRPS PLDDPPTASS SDSEEEEQRP SSEQRHAEDE EVASSEEEED SSEEDDDDDE  60
EHNPKPASQN PPPPPTNSLP KPSSSESETD SDSGSDSEPD PNPNPKVKPL ASKPMEQAQK  120
PKAHPSPTPS KSGSKRAAEN HAHVTGPKRA KKKATDFSGG GSDEEVEEDG KKSGELSKKF  180
QRIWSEEDEL AILKGMVDFT SNTGQDPFKY ANAFHDFMKK SLHFDASSNQ LKEKIRRLKK  240
KFETNSGKGK NGNGPKFSKP HDQKSYELSK KVWGNEQVET ANGAIEKEKS NGKAAKSPKK  300
EASGSRNVAT SGKKLKPETK PEPERISEVL TESGKMDIDP KPDGDTGLLL SEMFCYQNGG  360
GGVYRLNEDD AKRGLQLIGE SKRAELEAKW KKIRAAEMKL YADRALLVGE QTSLILEALQ  420
PSNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-25	GeBP family protein