PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027329331.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1137aa MW: 127104 Da PI: 6.5094

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027329331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9.5e-23	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ ++W +++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_027329331.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-QELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEK 217 99***************************9545444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_027329331.1 218 QQLLLGIRRA 227 889**997 PP
2	Auxin_resp	125.1	4.6e-41	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_027329331.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1137 aa Download sequence
MKAPSNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 TDFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYEKEAIL ASDMGLKQSR 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELVAKD LHDNTWAFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIRRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP 360 FYICPPPFFR PKFPRQPGMP DDESDIENAF KRAMPWLGDD FGMKDASSSL FPGLSLVQWM 420 SMQQNNQLSA APSGCFPSML PSNTLHANLT PDDPSKLLSF QTPVLSAPNL QFNKPNLPNQ 480 INQLQQSPVS WPQQQQQLQQ QQQQQQLQQQ QQQQQQQQQQ LQQQQQQVQH QQQQQLQSLL 540 QIPMNQLQQQ RQQQLPEPQN LPLLHQLPQQ PQKQQQSSQH ATIMNNGVVA SNQISNQFVQ 600 PQGAYTQLQQ QQSLPGGIPP QQSIQSANKN TFPLTSLPQD SQFQQQIDQQ ASLLQRQQQQ 660 THLQQSPLQL LQQNLPQRAP QLPPVTQMLQ QNPSEQHHLQ LLQTLQQQQQ QQHLSTSSPL 720 LQSQLLQQQN THQQSQQLPP LPVSQHIPQQ FGNHPLSAEK LLNSNFSSST LMQSQHLPVN 780 QPQNTQKSLT ITRAPSTLTD GDAPSCSTSP STNNCQISPP NLLKRNQQLP ATLGGSLVVE 840 PTSNLIQELQ SKPDVQIKHE LPNIKGPDQL KYKGAITDQL EASSSGTSYC LDPGNVQQNL 900 PLSNFCMEGD VQSHPRNSLP FDSNLDGLTP DTMLLRGYDS PKDLQNLLSN YGGAPRDIET 960 ELSTADISSQ SFGVPNMPFK PGCSSDAGIN DTGVLNNSSL RANQTQRMRT YTKVQKRGSV 1020 GRCIDVTRYK GYDELRHDLA RMFGIEGQLE DPQRTDWKLV YVDHENDILL VGDDPWDEFV 1080 TCVQSIKILS SAEVQQMSLD GDLGGGTVPI PNQACSGDSG NAWRGQYDDN SAASFNR

Sequence ? help Back to Top

Protein Sequence Length: 1137 aa Download sequence

MKAPSNGYLP NSGEGERKTI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
TDFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYEKEAIL ASDMGLKQSR  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDYSMQ PPAQELVAKD LHDNTWAFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIRRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP  360
FYICPPPFFR PKFPRQPGMP DDESDIENAF KRAMPWLGDD FGMKDASSSL FPGLSLVQWM  420
SMQQNNQLSA APSGCFPSML PSNTLHANLT PDDPSKLLSF QTPVLSAPNL QFNKPNLPNQ  480
INQLQQSPVS WPQQQQQLQQ QQQQQQLQQQ QQQQQQQQQQ LQQQQQQVQH QQQQQLQSLL  540
QIPMNQLQQQ RQQQLPEPQN LPLLHQLPQQ PQKQQQSSQH ATIMNNGVVA SNQISNQFVQ  600
PQGAYTQLQQ QQSLPGGIPP QQSIQSANKN TFPLTSLPQD SQFQQQIDQQ ASLLQRQQQQ  660
THLQQSPLQL LQQNLPQRAP QLPPVTQMLQ QNPSEQHHLQ LLQTLQQQQQ QQHLSTSSPL  720
LQSQLLQQQN THQQSQQLPP LPVSQHIPQQ FGNHPLSAEK LLNSNFSSST LMQSQHLPVN  780
QPQNTQKSLT ITRAPSTLTD GDAPSCSTSP STNNCQISPP NLLKRNQQLP ATLGGSLVVE  840
PTSNLIQELQ SKPDVQIKHE LPNIKGPDQL KYKGAITDQL EASSSGTSYC LDPGNVQQNL  900
PLSNFCMEGD VQSHPRNSLP FDSNLDGLTP DTMLLRGYDS PKDLQNLLSN YGGAPRDIET  960
ELSTADISSQ SFGVPNMPFK PGCSSDAGIN DTGVLNNSSL RANQTQRMRT YTKVQKRGSV  1020
GRCIDVTRYK GYDELRHDLA RMFGIEGQLE DPQRTDWKLV YVDHENDILL VGDDPWDEFV  1080
TCVQSIKILS SAEVQQMSLD GDLGGGTVPI PNQACSGDSG NAWRGQYDDN SAASFNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein