PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027185707.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 327aa    MW: 36248.1 Da    PI: 6.5998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027185707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-1987135355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_027185707.1  87 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARKIRG 135
                     9*******.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MCGGAILEGL IPPRNNNDGT RRLSSADLWP SAAEFWPNSH LAKPSRSNPT DAPHKATHET  60
FHDPHDEAGG KQQVLPKGAK RQRKNLYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE  120
EAARAYDKEA RKIRGKKAKV NFPNEDSTSH PTCIPSQPQY QQVHIPSPPT FCGPSSSNGK  180
FNQLRVGSSD CSASDCYHAN SIDDCVRINN MMGFRNPSEE VSGSGSSDNE CFLGHLKQVA  240
KAEEEEASVI TENDTKDNNK AAESEEYQVE KLSEELLAYE SFMKFYQIPY IDGQSAAASA  300
NPAQELATSI QLWSFDDVSP ANRPMPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-43ERF family protein