PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027184953.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 463aa MW: 50335.1 Da PI: 5.5075

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027184953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.5	2e-30	227	282	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsek.AtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe Fv+av++LGGse AtPk +l++m+ +gLt++hvkSHLQkYR+ XP_027184953.1 227 KPRMRWTPELHEIFVDAVNKLGGSETgATPKGVLKHMNKEGLTIYHVKSHLQKYRT 282 79*******************98659*************************8 PP
2	Myb_DNA-binding	60.9	2.7e-19	229	281	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav++lGg t+k + ++m+ +g+t +++ks++qky+ XP_027184953.1 229 RMRWTPELHEIFVDAVNKLGGSetgaTPKGVLKHMNkEGLTIYHVKSHLQKYR 281 89****************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDAHSSLFIQ RTGESLSTMG ASGATSPCLP NLPPPLVEKY PQLPDSLHVT SEQVLSTNTL 60 PSRPAPLASR SGAVGHQFST TSGFPRDTKF PPISPQGSQS QNYPFLSKSL RAETSLETIP 120 SSFSGVHSAP VDSYHIGNGG NGNTSWGKDA LQDFPDFSDD LISVDDSLDS NWGDLLVDVS 180 FPDPEPKVLK LSPEVPLREA QPSSHTPVSS VQSIDVSSPS SAAPLAKPRM RWTPELHEIF 240 VDAVNKLGGS ETGATPKGVL KHMNKEGLTI YHVKSHLQKY RTARYKPEPS EGTTEKKSPT 300 VTDMTSLDLK TTTGITEALR LQMEVQKQLH EQLEIQRSLQ LRIEEQGKYI QLMLEQQKKI 360 EEERSKKKDS NPVEASLAPS KAVEPLPDDE KSETLEKNNV AKALEKENEA KVLSSGDAGV 420 TAEQTQTPNR KQKSPEGKTS EDNDQDGNAS PVKRAKVDGS LNS

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDAHSSLFIQ RTGESLSTMG ASGATSPCLP NLPPPLVEKY PQLPDSLHVT SEQVLSTNTL  60
PSRPAPLASR SGAVGHQFST TSGFPRDTKF PPISPQGSQS QNYPFLSKSL RAETSLETIP  120
SSFSGVHSAP VDSYHIGNGG NGNTSWGKDA LQDFPDFSDD LISVDDSLDS NWGDLLVDVS  180
FPDPEPKVLK LSPEVPLREA QPSSHTPVSS VQSIDVSSPS SAAPLAKPRM RWTPELHEIF  240
VDAVNKLGGS ETGATPKGVL KHMNKEGLTI YHVKSHLQKY RTARYKPEPS EGTTEKKSPT  300
VTDMTSLDLK TTTGITEALR LQMEVQKQLH EQLEIQRSLQ LRIEEQGKYI QLMLEQQKKI  360
EEERSKKKDS NPVEASLAPS KAVEPLPDDE KSETLEKNNV AKALEKENEA KVLSSGDAGV  420
TAEQTQTPNR KQKSPEGKTS EDNDQDGNAS PVKRAKVDGS LNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	6e-67	G2-like family protein