PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027184494.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 230aa    MW: 25243.1 Da    PI: 5.7417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027184494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.6e-1955104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr++  +g+WvAeIr+p     +  +r++lg+f t +eAa+a++ a+k+l+g
  XP_027184494.1  55 TYRGVRQRT-WGKWVAEIREP-----NhgARVWLGTFNTSYEAARAYDDAAKRLYG 104
                     69****999.**********9.....336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MMERVENEGV NVGIPVDKKP KKEAAISTSM KKITVGGSRK GCMRGKGGPE NAFCTYRGVR  60
QRTWGKWVAE IREPNHGARV WLGTFNTSYE AARAYDDAAK RLYGKCAKLN LPEEDQPPSP  120
PSSSSVASAA YSNNTGYKNG QDLTNEHQSP ELEDKKNGTS VLDEVSIFKD INGEFAFDET  180
PAPSLLGEEQ ILNWPEYPFD NGFHWSNDGG ISVGGLIDHA VVYKFLGPPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-42ERF family protein