PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027184052.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 455aa MW: 52734.2 Da PI: 6.5539

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027184052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.2	3.6e-25	70	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+++ + +r f+Cs+egk+ ++k++ + +r+etr++C a++k++ +k gk++v +++ eHnHel+ XP_027184052.1 70 NFYQKYAKASGFGTRLSKGHKDKNSDLMLDRVFCCSREGKKPKDKRN-MIVKCPRPETRCECSARMKISCRKGGKYRVVQFVAEHNHELS 158 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MENDLPTHEI QSCRKLDFED VDLQEINDNA LPLCITDGNH GNQIFLPLAI PDDLVPKLDM 60 EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR VFCCSREGKK PKDKRNMIVK 120 CPRPETRCEC SARMKISCRK GGKYRVVQFV AEHNHELSTP SKTHLFRSHR HLTMAHEAEI 180 DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQGD TGGVLEYLQG 240 MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMEKIP RTILTDQDGR MATALASQWP 360 TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSHCIYDY ENEDDFFEGW SEMLKTYGLE 420 DKKWLKKMFD IKEKWALVYG RETFCADMTT TQRII

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MENDLPTHEI QSCRKLDFED VDLQEINDNA LPLCITDGNH GNQIFLPLAI PDDLVPKLDM  60
EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR VFCCSREGKK PKDKRNMIVK  120
CPRPETRCEC SARMKISCRK GGKYRVVQFV AEHNHELSTP SKTHLFRSHR HLTMAHEAEI  180
DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQGD TGGVLEYLQG  240
MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV  300
GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMEKIP RTILTDQDGR MATALASQWP  360
TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSHCIYDY ENEDDFFEGW SEMLKTYGLE  420
DKKWLKKMFD IKEKWALVYG RETFCADMTT TQRII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-97	FAR1 family protein