PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027183764.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 814aa MW: 89959.5 Da PI: 6.1182

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027183764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.6	3.9e-31	327	384	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +Dgy+WrKYGqK+vkgse+prsYY+C ++Cpvkkkvers+ d++++ei+Y+g Hnh+k XP_027183764.1 327 EDGYSWRKYGQKHVKGSEYPRSYYKCNNSNCPVKKKVERSH-DGEITEIIYKGAHNHPK 384 8**************************************.*************85 PP
2	WRKY	105.7	2.4e-33	547	605	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++d k v +tYeg+Hnhe XP_027183764.1 547 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASDDIKSVLTTYEGKHNHE 605 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MVPYNPIDSH SKDFGVRGCG RSVDHYFLLE MEVNGETFND WGALVVVDEF ESKPGEDYGE 60 TERNNIGDIC TNGVNGASDN SSININNNEN CNNDVHLDDQ SKKSSSSSSP EVEFRGSIAE 120 RRAAKFGFDA SRINVAKFEV STSPSSPLVR SPYLTIPSGL SPAALLDSPV MLPNSQPSPT 180 TGTLQLLHSN HDSFVLNSDS PAADRDKGSA IHTSNPFKPP ADPTPIISGP LSSENQLPMT 240 SKSPPESRIE ASVKSCALER SIKTNIFETM PQKANHVNSQ TPNISVVNNQ LPHLREGIKS 300 ETGIQELHRE DQKGTYPGAA EMSRNAEDGY SWRKYGQKHV KGSEYPRSYY KCNNSNCPVK 360 KKVERSHDGE ITEIIYKGAH NHPKPHPRIS LGPPSQSSEM LETSEGSEPG LKAENRTGWR 420 FNNQLIRSKD FRITSDWRPN GMERTSSTSV LTEILDPLAT TQGKSAKAFG STETPEIALT 480 AAYQDGEDDD RATQGSTSQG DEADADESEP KRRQVIFYFC TLQSYLPSRS TREPRVIVQI 540 ESEIDVLDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCPV RKHVERASDD IKSVLTTYEG 600 KHNHEVPTNK TSGLPSASNS PPDVSDPNSS LIVPRNPSIS NRELQVQDLP LHYEMKPALG 660 NHDFLRSNLL GDFVTDHMQI GASPIYQMKF PPTPLQNPLS YSTFLMNSSG SDSRVSCQKF 720 PPVVPDFPMS IPINVPRSSP NMALNNAFHS YNHNQTIPNA TAVRCQHITE GDLRFLRPKE 780 EKEDNLYETC LATPDNSNVT SSTEFCRANG NFPS

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MVPYNPIDSH SKDFGVRGCG RSVDHYFLLE MEVNGETFND WGALVVVDEF ESKPGEDYGE  60
TERNNIGDIC TNGVNGASDN SSININNNEN CNNDVHLDDQ SKKSSSSSSP EVEFRGSIAE  120
RRAAKFGFDA SRINVAKFEV STSPSSPLVR SPYLTIPSGL SPAALLDSPV MLPNSQPSPT  180
TGTLQLLHSN HDSFVLNSDS PAADRDKGSA IHTSNPFKPP ADPTPIISGP LSSENQLPMT  240
SKSPPESRIE ASVKSCALER SIKTNIFETM PQKANHVNSQ TPNISVVNNQ LPHLREGIKS  300
ETGIQELHRE DQKGTYPGAA EMSRNAEDGY SWRKYGQKHV KGSEYPRSYY KCNNSNCPVK  360
KKVERSHDGE ITEIIYKGAH NHPKPHPRIS LGPPSQSSEM LETSEGSEPG LKAENRTGWR  420
FNNQLIRSKD FRITSDWRPN GMERTSSTSV LTEILDPLAT TQGKSAKAFG STETPEIALT  480
AAYQDGEDDD RATQGSTSQG DEADADESEP KRRQVIFYFC TLQSYLPSRS TREPRVIVQI  540
ESEIDVLDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCPV RKHVERASDD IKSVLTTYEG  600
KHNHEVPTNK TSGLPSASNS PPDVSDPNSS LIVPRNPSIS NRELQVQDLP LHYEMKPALG  660
NHDFLRSNLL GDFVTDHMQI GASPIYQMKF PPTPLQNPLS YSTFLMNSSG SDSRVSCQKF  720
PPVVPDFPMS IPINVPRSSP NMALNNAFHS YNHNQTIPNA TAVRCQHITE GDLRFLRPKE  780
EKEDNLYETC LATPDNSNVT SSTEFCRANG NFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	4e-75	WRKY family protein