PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027183576.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 294aa MW: 33375.8 Da PI: 8.6948

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027183576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3.2e-33	50	103	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH++Fv+av++LGG+++AtPk++l++m+vkgLt++hvkSHLQ+YR+ XP_027183576.1 50 PRLRWTQDLHHCFVHAVQRLGGEDRATPKAVLQMMNVKGLTVSHVKSHLQMYRS 103 8****************************************************7 PP
2	Myb_DNA-binding	54.1	3.6e-17	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k++ ++m+ kg+t ++ks++q+y+ XP_027183576.1 51 RLRWTQDLHHCFVHAVQRLGGEdraTPKAVLQMMNvKGLTVSHVKSHLQMYR 102 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MSNSPSFQSL DNSADTDNSS VTILEEKMVE IPSQSSVRSR VRPYVRSKLP RLRWTQDLHH 60 CFVHAVQRLG GEDRATPKAV LQMMNVKGLT VSHVKSHLQM YRSMMQEQTI KEARIEAGKG 120 NKMQRGIQQP SYFFLHPTSP PQPQYYHYQY KHRLGFGFPN YYMSAPFLYQ NNTPTSITYG 180 AQVYKELLPP TITPGLPNNT WKEMPAAANI EYHRNMFDMQ LPLPIFCNDD FLGRIDGQAG 240 VNEKNEQVPD EASSSSKKMK KIVEGGCSTI FYKEAPGSSA TKDENDINLE LTLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-25	G2-like family protein