PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | CPP | ||||||||
Protein Properties | Length: 959aa MW: 103065 Da PI: 6.5279 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 47.8 | 2.8e-15 | 549 | 587 | 3 | 41 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_027183544.1 549 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 587 79**********************************876 PP | |||||||
2 | TCR | 48.9 | 1.3e-15 | 633 | 671 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce C+N XP_027183544.1 633 RHKRGCNCKKSKCLKKYCECYQANVGCSDGCRCEACENV 671 589***********************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 959 aa Download sequence |
MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP 60 PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR 120 SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL 180 DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP 240 DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG 300 VQCTESLENK VHRHCAQIVQ HQHGISRRCL QFEDTQGKII PNSGYQNSSG SDGYPRSPAS 360 PAGSEVLESA SLNKPASPSN RLLANMTPPF FSPQTSGNYN SKLPKRSGIG LHLNSIINSM 420 QMGSGAKVSM RSAERGSFNG LGKKSMSITG SSLHHNFSTS ANVEGVPISD ESRHNEHASG 480 AANSASTLSP CSMKPLYEPV VLKPIELQPN SSNKRMCTSE TSDSFVDFGQ SSPKKKRKKT 540 LDAGDGSGCK RCNCKKTKCL KLYCDCFAAG IYCAEPCACQ GCFNRPEYED TVLETRQQIE 600 SRNPLAFAPK IIQHLTEPPT NEDGSHFTPS SARHKRGCNC KKSKCLKKYC ECYQANVGCS 660 DGCRCEACEN VYGQKGEFGM IKDLISKHGE KLDSSFGTTL ESVASKDGLL HNELYNPHSL 720 TPLTPAFQCS DHGKGAPKAW LSSGGYLQSP ESCLTYLAPY GMSPGQAGNP DTHNMIIEAN 780 TGIMDLVSFG QGIGYGNEHT VNQSSPRCEV PRNDGRLAAL PDPQDWENTS RAQTYANHQV 840 SSANSLRWRR SSTHFDGTKP DEAVDFDGGL YSILDDDTPE ILKETPMPPN AIKVSSPNKK 900 RVSPPHGQGT EPGSSSSTGL RTGRKFILQA VPSFPPLTPC IDSKGATGMN NSQKSSSGK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 535 | 539 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 8e-64 | CPP family protein |