PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027183543.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 962aa MW: 103367 Da PI: 6.5273

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027183543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.8	2.8e-15	549	587	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+N+ e XP_027183543.1 549 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 587 79**********************************876 PP
2	TCR	48.9	1.3e-15	636	674	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce C+N XP_027183543.1 636 RHKRGCNCKKSKCLKKYCECYQANVGCSDGCRCEACENV 674 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 962 aa Download sequence
MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP 60 PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR 120 SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL 180 DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP 240 DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG 300 VQCTESLENK VHRHCAQIVQ HQHGISRRCL QFEDTQGKII PNSGYQNSSG SDGYPRSPAS 360 PAGSEVLESA SLNKPASPSN RLLANMTPPF FSPQTSGNYN SKLPKRSGIG LHLNSIINSM 420 QMGSGAKVSM RSAERGSFNG LGKKSMSITG SSLHHNFSTS ANVEGVPISD ESRHNEHASG 480 AANSASTLSP CSMKPLYEPV VLKPIELQPN SSNKRMCTSE TSDSFVDFGQ SSPKKKRKKT 540 LDAGDGSGCK RCNCKKTKCL KLYCDCFAAG IYCAEPCACQ GCFNRPEYED TVLETRQQIE 600 SRNPLAFAPK IIQHLTEPPT NVCVEDGSHF TPSSARHKRG CNCKKSKCLK KYCECYQANV 660 GCSDGCRCEA CENVYGQKGE FGMIKDLISK HGEKLDSSFG TTLESVASKD GLLHNELYNP 720 HSLTPLTPAF QCSDHGKGAP KAWLSSGGYL QSPESCLTYL APYGMSPGQA GNPDTHNMII 780 EANTGIMDLV SFGQGIGYGN EHTVNQSSPR CEVPRNDGRL AALPDPQDWE NTSRAQTYAN 840 HQVSSANSLR WRRSSTHFDG TKPDEAVDFD GGLYSILDDD TPEILKETPM PPNAIKVSSP 900 NKKRVSPPHG QGTEPGSSSS TGLRTGRKFI LQAVPSFPPL TPCIDSKGAT GMNNSQKSSS 960 GK

Sequence ? help Back to Top

Protein Sequence Length: 962 aa Download sequence

MDSSPEQPSK PNNSTHSPPL PIPPLQVQES PVFSYISNLS PIKPDKAALG SQGFPGINSP  60
PLVFRSPHIN PNSQPSFLKR PQSAGSSDAG LSEEHESCKD TLTVAEESRV SSCHLSSRLR  120
SCPQKEFIDD SKPEKASSPP VCGNDYLTDI VNMDGGDSDS SANLTPKSSD DVSQSQHELL  180
DSKESAENTE DKDDTRREEM KMGAASVTLE QAEEYNLKDS PSDLKSVVPD QNSGDGNGPP  240
DLHPRVEPDK SVGHALENQS GGRSMAENAG SGHVIEVGCN LLSESLQVAQ DCGRSLENAG  300
VQCTESLENK VHRHCAQIVQ HQHGISRRCL QFEDTQGKII PNSGYQNSSG SDGYPRSPAS  360
PAGSEVLESA SLNKPASPSN RLLANMTPPF FSPQTSGNYN SKLPKRSGIG LHLNSIINSM  420
QMGSGAKVSM RSAERGSFNG LGKKSMSITG SSLHHNFSTS ANVEGVPISD ESRHNEHASG  480
AANSASTLSP CSMKPLYEPV VLKPIELQPN SSNKRMCTSE TSDSFVDFGQ SSPKKKRKKT  540
LDAGDGSGCK RCNCKKTKCL KLYCDCFAAG IYCAEPCACQ GCFNRPEYED TVLETRQQIE  600
SRNPLAFAPK IIQHLTEPPT NVCVEDGSHF TPSSARHKRG CNCKKSKCLK KYCECYQANV  660
GCSDGCRCEA CENVYGQKGE FGMIKDLISK HGEKLDSSFG TTLESVASKD GLLHNELYNP  720
HSLTPLTPAF QCSDHGKGAP KAWLSSGGYL QSPESCLTYL APYGMSPGQA GNPDTHNMII  780
EANTGIMDLV SFGQGIGYGN EHTVNQSSPR CEVPRNDGRL AALPDPQDWE NTSRAQTYAN  840
HQVSSANSLR WRRSSTHFDG TKPDEAVDFD GGLYSILDDD TPEILKETPM PPNAIKVSSP  900
NKKRVSPPHG QGTEPGSSSS TGLRTGRKFI LQAVPSFPPL TPCIDSKGAT GMNNSQKSSS  960
GK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	535	539	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	6e-62	CPP family protein