PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 236aa MW: 26774.7 Da PI: 4.7598 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.8 | 1.1e-19 | 48 | 100 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f+++q++ Le++Fe ++ p + +++LA+klgL+ rqV +WFqN+Ra+ k XP_027183124.1 48 KRRFNDDQIRYLESMFEAESRPELRVKQQLANKLGLQPRQVAIWFQNKRARSK 100 568************************************************99 PP | |||||||
2 | HD-ZIP_I/II | 111.1 | 7.2e-36 | 48 | 138 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 krr++++q++ LE++Fe+e++ e + K++la++Lglqprqva+WFqn+RAR k+kq+E+dy++Lk++yd l+++ e+L+ke e+L+ e+++ XP_027183124.1 48 KRRFNDDQIRYLESMFEAESRPELRVKQQLANKLGLQPRQVAIWFQNKRARSKSKQIEQDYSVLKASYDDLASKFESLKKESESLHVEVQK 138 9*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MFQRGTAPPA CPIPSSSWTA QHVPADEVVE LELHSMSGSS TTSKTISKRR FNDDQIRYLE 60 SMFEAESRPE LRVKQQLANK LGLQPRQVAI WFQNKRARSK SKQIEQDYSV LKASYDDLAS 120 KFESLKKESE SLHVEVQKLR QLTIRSGKEE YGREDIELEA DQTTEFLLKA SSSHEQRSAI 180 CDENFTRSTD YLVEATNSLY MAQLADGSLT STEDGCSFEA NDLIDNSSCN SQLWEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 2e-27 | HD-ZIP family protein |