PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027183053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 783aa MW: 89143.4 Da PI: 6.4418 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 66.9 | 5.4e-21 | 97 | 185 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY++YA+ GF+vrk +k++ n+ i ++vCs+eg++e++ + + +r ++++tr+gC a++++k + +gk++vt + +eHnHel+ XP_027183053.1 97 FYETYANLNGFTVRKVDTKRK--NNVIRYTRWVCSREGFSENRWANnLDGKRDPKSVTRIGCLASFRIKHDFkSGKYVVTGFIKEHNHELM 185 9**************998776..8889**************998774678899******************99****************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 783 aa Download sequence |
MDATARSACQ RVSIDLSVDG IGDSDSGEGN RRSVEDNEVN IDADNNHGST SGGAELDTRN 60 DNTREVSWVE LHKGLEDLTE KEVFGLKFDS DEEAGIFYET YANLNGFTVR KVDTKRKNNV 120 IRYTRWVCSR EGFSENRWAN NLDGKRDPKS VTRIGCLASF RIKHDFKSGK YVVTGFIKEH 180 NHELMAPRVL PCLQPKKRAR RVAGDVGFTR KDRERASMSS DIADGDTRCV LTQCVLAWLC 240 AKSDYDPGLF YKYDVDEENK LCRIFWADSK SRADYAFFGD VLALNTKFRK NAYGKPFIIL 300 AGLNNHDQTI VFACALLGDE TAETYVWLLE TFLEAMNDKA PVSVITDGSK AIEEALEKTF 360 PMSKHRICRW HLHKDAVSNA SDSSFGPDFK KCMEENWSPE QFEVAWMELL EKYGLQGHPW 420 FEETYSRRTK WAEAYLREHF FAGLNSILGH GMNTYFTRFL KVRLKLHEFV RYYDKALVCL 480 REEEAKADTE SESTYPAFCT VLRDLEMHAA DVFTKSIFFK VREQIMRDPM LILSSKEYLD 540 DEACWVYSFS EYTKPDMVWK VHYHPSNQRL TCTCFKLVTD GVPCCHMISV MKAEHLREFP 600 RCCINKRWTK CARSKIASSI DIQALNMATQ VARFRVLTSA CSEMNYYASQ TVQGFNETRN 660 LISKMMSHVK PIHTSKGDVD EPAPEVSQDA DGSSTRSGMH DPRSTNSNGQ CDSSAVGTSR 720 PGNWGQSRST SHDQFLFQLL HLNHGSQRPE GTGTTEDGLK CIPNGNLPEM PSLPLNLMWE 780 DSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-90 | FAR1 family protein |