PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182998.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 743aa MW: 85288.7 Da PI: 6.5404

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.4	1.4e-24	59	148	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 fY++YAk vGF+vrk ++++ ++n ++ r +vCs+eg+re++ + +++r +++++r+gC a+++vk +k +gk++vt++ +eHnHelap XP_027182998.1 59 FYETYAKLVGFNVRKVHTRRDENN-KVRYRGWVCSREGFRENRINMWDRKRDPKPVSRIGCLAHFRVKYDKkSGKYVVTSFIKEHNHELAP 148 9**************9999555.59**************************************999**************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MNIDTENNNR SKTAGAEPDT RTDDARDVSW VDLDKGLHEL TENDVFHLKF DCDEEAGLFY 60 ETYAKLVGFN VRKVHTRRDE NNKVRYRGWV CSREGFRENR INMWDRKRDP KPVSRIGCLA 120 HFRVKYDKKS GKYVVTSFIK EHNHELAPPI VVPFLQPQKR ARRVAVDVGF TKKDIEREWA 180 SSDIRDGDSR CVLTHSVLAY LSAKNDYDPG LFYKYDLDEE NQLCSIFWAD SKSRADYAFF 240 GDVLVLNTKF RKNAYEKPFI ILAGLNNHDQ TTVFGCALLG GKTAETYVWL LETFLEATNH 300 KAPVSVITDG DKAIEEAIQK TFPTSQHRIC RWHLFKDAVS SAGDSSSFGP EFKKCMEENW 360 NPEEFEVAWI KLVEKYGLQG HPWFEETYSR RTKWAEAYLR EHFFAGLTSI RGHGMNTYFT 420 RFLQVWHKLH EFVRHYDKAL VCLREDEAKA DSESESAYPA FCTILRDLER HAADVFTRSM 480 FLKVREQIMG DAMLILSGKE YLKDDACWLY KFSEYMKPDA IWKVRYDPSN QSLKCSCFKL 540 VTDGVPCCHM VSVMKAEHLR EFPRCCIHKR WTKCARSEID SGIDIQALNM ATQVARFRIL 600 NSTCSEMNYY ASQTIQGFNE TRSLISKITS RVKHIYNSKG EVDETAPEVS LDADGSTTRS 660 GMHDPKSTNS SGQCDATAVE TPQPDDCSQR SHDQTTSQQL RLNHGLQTSE GTGTTDDGEG 720 RTQNGEFSGA PSQPINLIWE DND

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MNIDTENNNR SKTAGAEPDT RTDDARDVSW VDLDKGLHEL TENDVFHLKF DCDEEAGLFY  60
ETYAKLVGFN VRKVHTRRDE NNKVRYRGWV CSREGFRENR INMWDRKRDP KPVSRIGCLA  120
HFRVKYDKKS GKYVVTSFIK EHNHELAPPI VVPFLQPQKR ARRVAVDVGF TKKDIEREWA  180
SSDIRDGDSR CVLTHSVLAY LSAKNDYDPG LFYKYDLDEE NQLCSIFWAD SKSRADYAFF  240
GDVLVLNTKF RKNAYEKPFI ILAGLNNHDQ TTVFGCALLG GKTAETYVWL LETFLEATNH  300
KAPVSVITDG DKAIEEAIQK TFPTSQHRIC RWHLFKDAVS SAGDSSSFGP EFKKCMEENW  360
NPEEFEVAWI KLVEKYGLQG HPWFEETYSR RTKWAEAYLR EHFFAGLTSI RGHGMNTYFT  420
RFLQVWHKLH EFVRHYDKAL VCLREDEAKA DSESESAYPA FCTILRDLER HAADVFTRSM  480
FLKVREQIMG DAMLILSGKE YLKDDACWLY KFSEYMKPDA IWKVRYDPSN QSLKCSCFKL  540
VTDGVPCCHM VSVMKAEHLR EFPRCCIHKR WTKCARSEID SGIDIQALNM ATQVARFRIL  600
NSTCSEMNYY ASQTIQGFNE TRSLISKITS RVKHIYNSKG EVDETAPEVS LDADGSTTRS  660
GMHDPKSTNS SGQCDATAVE TPQPDDCSQR SHDQTTSQQL RLNHGLQTSE GTGTTDDGEG  720
RTQNGEFSGA PSQPINLIWE DND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-88	FAR1 family protein