PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182119.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 684aa MW: 79491 Da PI: 8.4868

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.1	4.7e-26	63	148	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA++ GFsvr+++ +ks+ +++i+ ++fvCskeg+r+++++k + +r +tr gCka + v+++++gkw +++l+leHnH la XP_027182119.1 63 CYSNYAHNKGFSVRRNRITKSRSDKSIIGQEFVCSKEGFRSKKDSK---ADMPRDKTRQGCKALVYVSQKEKGKWIIARLVLEHNHVLA 148 7**************************************99877...999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MGTECRMECE LGTECPMEQD QFDHDAAHGS MPEDSTNEQI EPGKEVNLYV GMEFESLGDA 60 FKCYSNYAHN KGFSVRRNRI TKSRSDKSII GQEFVCSKEG FRSKKDSKAD MPRDKTRQGC 120 KALVYVSQKE KGKWIIARLV LEHNHVLASP YSKKFLRSKR KKSVAQKNLI DMLDQSGVRP 180 SKIVSVLATQ VGGIGNLNVT DHDVCNYLST KRHKELEKGD AQLMLQYFQK RQSENPGFFY 240 AIQVDIEGRL ANCFWADAKS RSLYKHFGDV VTFDPTYLTN KYKMPFVPLT GVNHHYQSIL 300 FGGALLWDET EESFVWLLQT WLEAMLGCPP KIVITDQDIA ITNVVARVLP HSTHHFCMWH 360 IEKKFPETLS HIYHQNNDFK YHFSKCIHDT ITPEEFEMAW TELIEKYKLQ NNTWIQKVYS 420 IRERWVPAFV RASFCAGMST TQRSESMNKF FKDYLNSSTA MSKFVTQYDR AIEARYDKEK 480 EKKFKTKNTK PILKTLYPME AEAAKVYTRK IFRMFQDELL ESQKYVSEKI TMKDGVYKYR 540 VHERQKEFPS YIVILNIVEQ KVECSCHKFE FVGILCKHAL MVFIKKQIHS LPMHYLLDRW 600 TMSAICGRDE GDFSEKLHQA EPLRNSSMWF NDIMVRSLGI SEKASRSAKH HRVALQGLQA 660 LSDKLDDLPY ENEQDSSLSI SQVD

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MGTECRMECE LGTECPMEQD QFDHDAAHGS MPEDSTNEQI EPGKEVNLYV GMEFESLGDA  60
FKCYSNYAHN KGFSVRRNRI TKSRSDKSII GQEFVCSKEG FRSKKDSKAD MPRDKTRQGC  120
KALVYVSQKE KGKWIIARLV LEHNHVLASP YSKKFLRSKR KKSVAQKNLI DMLDQSGVRP  180
SKIVSVLATQ VGGIGNLNVT DHDVCNYLST KRHKELEKGD AQLMLQYFQK RQSENPGFFY  240
AIQVDIEGRL ANCFWADAKS RSLYKHFGDV VTFDPTYLTN KYKMPFVPLT GVNHHYQSIL  300
FGGALLWDET EESFVWLLQT WLEAMLGCPP KIVITDQDIA ITNVVARVLP HSTHHFCMWH  360
IEKKFPETLS HIYHQNNDFK YHFSKCIHDT ITPEEFEMAW TELIEKYKLQ NNTWIQKVYS  420
IRERWVPAFV RASFCAGMST TQRSESMNKF FKDYLNSSTA MSKFVTQYDR AIEARYDKEK  480
EKKFKTKNTK PILKTLYPME AEAAKVYTRK IFRMFQDELL ESQKYVSEKI TMKDGVYKYR  540
VHERQKEFPS YIVILNIVEQ KVECSCHKFE FVGILCKHAL MVFIKKQIHS LPMHYLLDRW  600
TMSAICGRDE GDFSEKLHQA EPLRNSSMWF NDIMVRSLGI SEKASRSAKH HRVALQGLQA  660
LSDKLDDLPY ENEQDSSLSI SQVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-157	FAR1 family protein