PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027182109.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 266aa    MW: 30855.4 Da    PI: 8.6438
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027182109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.27.7e-251199190
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    +fY++YAk  GF +r sk +k k+++ + +r f+Cs+egkr ++k +    + +r+etr++C  ++k++ ++ gk++v +l+ +HnHel+
  XP_027182109.1 11 NFYQKYAKASGFGTRLSKGHKDKTSDMVLDRVFCCSREGKRPKDKGN-MIVKCPRPETRCDCGVRMKITYRQAGKYRVVQLVAQHNHELS 99
                    6******************************************9999.99999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEFDTEVATR NFYQKYAKAS GFGTRLSKGH KDKTSDMVLD RVFCCSREGK RPKDKGNMIV  60
KCPRPETRCD CGVRMKITYR QAGKYRVVQL VAQHNHELST PSKTHIFRSH RHMTMAHEAE  120
IDMARSCEIA LKQSIELMSK QVGGQENLGF IRDDLKNYLR SKRSIPMMQG DTGGVLEYLR  180
MMQLEDPNFY YAIQVDEDDL ITNIFGVDAK MRTDFAHFGD MVCFDTIYRK HKDERPITLF  240
VGVNHHKQTI VFRTALLYDE IIGTFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-54FAR1 family protein