PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181851.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 376aa MW: 43440 Da PI: 6.766

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7.1e-22	93	183	2	89
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 fYn Y++ +GFs+r+ + kk ++++++ r +vCs+eg+r+e++ ++++r+ +a+tr++C a+lk+++++ +gk+ v+ + +eHnH+l XP_027181851.1 93 FYNIYGRATGFSIRRGYAKKDpEDSTTVRYRSWVCSREGERDEKHILrNDRKREAKAVTRVNCGACLKIRLDDnEGKYIVSCFAKEHNHQL 183 9**************999977778899999*****99986556889999*************99*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MKRTMKIEQD MDENGHRKGK GHNFDLNAYA YCEDDIVAWK WMCGEMGVED SKADEKMNNM 60 VNGGAIDAEN VDDQQEIDLM TMKFDTIEDA ECFYNIYGRA TGFSIRRGYA KKDPEDSTTV 120 RYRSWVCSRE GERDEKHILR NDRKREAKAV TRVNCGACLK IRLDDNEGKY IVSCFAKEHN 180 HQLGNHASIP FMRSHRKVAD SDYAQAHTFR RAGIRTSQIM KLFVLQVGGY QNVPFLIKDL 240 YNKMNCEKLR EIADGDAERA IGRLAAKKET DNNYYYEYCC DSQGRLTRLL WADSWSRMDF 300 KCYGDVLVFD STYRTQSYKM PLVVLCGVNN HYSTAIFACA LIADENEESY DWVLKSLLSA 360 WAGRSQFQLS LTVTRQ

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MKRTMKIEQD MDENGHRKGK GHNFDLNAYA YCEDDIVAWK WMCGEMGVED SKADEKMNNM  60
VNGGAIDAEN VDDQQEIDLM TMKFDTIEDA ECFYNIYGRA TGFSIRRGYA KKDPEDSTTV  120
RYRSWVCSRE GERDEKHILR NDRKREAKAV TRVNCGACLK IRLDDNEGKY IVSCFAKEHN  180
HQLGNHASIP FMRSHRKVAD SDYAQAHTFR RAGIRTSQIM KLFVLQVGGY QNVPFLIKDL  240
YNKMNCEKLR EIADGDAERA IGRLAAKKET DNNYYYEYCC DSQGRLTRLL WADSWSRMDF  300
KCYGDVLVFD STYRTQSYKM PLVVLCGVNN HYSTAIFACA LIADENEESY DWVLKSLLSA  360
WAGRSQFQLS LTVTRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-45	FAR1 family protein