PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181812.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 391aa MW: 45183.4 Da PI: 6.8834

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.7	4.4e-24	21	108	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ vGFsvrk++ +k ++g +t+r+++C keg++ + + + +k +rtraet+tgC+ak+ + +++ + k++v +l+ eHnH+l XP_027181812.1 21 NFYNRYGLVVGFSVRKDYLNKD-KDGVVTSRRYTCCKEGFKPQYEGD-VKPKRTRAETKTGCEAKMGIILNReTMKYQVRDLVIEHNHTL 108 6***************9998.8999**********999999.9***************999989************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEGFK 60 PQYEGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDL VIEHNHTLHI SECAHMMRSQ 120 RKVSISQGAQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG 180 EAGAMLRYFE EQKLENPSFF HAEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT 240 NKEYRPLGVF VGFNQFRQLV IFGATLLYDK TIESFKWVFG TFVEAVCGRH PKTIFTDQDV 300 AMAAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFAECMYE IEDENEFIMA 360 WDAMLKEHKL ETNEWLCGIY ACRKKNGQNA S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEGFK  60
PQYEGDVKPK RTRAETKTGC EAKMGIILNR ETMKYQVRDL VIEHNHTLHI SECAHMMRSQ  120
RKVSISQGAQ AEIANDAGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG  180
EAGAMLRYFE EQKLENPSFF HAEQLDCEEQ ITNIFWADAS MLMDYTYFGD VITFDTTYKT  240
NKEYRPLGVF VGFNQFRQLV IFGATLLYDK TIESFKWVFG TFVEAVCGRH PKTIFTDQDV  300
AMAAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFAECMYE IEDENEFIMA  360
WDAMLKEHKL ETNEWLCGIY ACRKKNGQNA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-73	FAR1 family protein