PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027181562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 638aa MW: 72076.6 Da PI: 5.9426 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.3 | 1.6e-14 | 439 | 485 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +Er+RR+++N++f L +l+P++ +Kl+K++iL A++Y+k+L+ XP_027181562.1 439 NHVLAERKRREKLNERFMMLGSLVPSN-----GKLDKVSILDGAIDYLKELE 485 7999**********************9.....9****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence |
MATGRLQNQP AESLRKQLAL AVKSIQWSYA IFWSISCRQP GVLEWIDGYY NGDIKTRKTI 60 QAAEPSADQL ELQRSEQLRE LYESLSAAET SPQAKRPSVA LSPEDLTDTE WYFLVCMSFV 120 FITGQGLPGR TLAKNQITWL CNAHQADSKV FPRSLLAKSA SIQTVVCFPH LGGVVELGVT 180 EPVVEDRNLI RHIKSAFLDN PYPVISKIPQ YVPNTNAKDI VVCGLDDDMI EANFEPLVEC 240 EDVKICSPSN STTGFEDADQ QAQNSHMMEG TSDEACHVQS WRFMDDEISN CIHDSMNSGD 300 CTPQTYANGE KGVPLSNEET VNHDFKHDLQ ECNLKKLDHF NFRSDDAHYQ GVLSALLKSS 360 HQLILGPYFT NSNQESSFVS WKIERPQFVQ KQGAMSQRVL KSVVFEVPRM HGDWKLKSSK 420 GYGKRESIWR PEADEIDNNH VLAERKRREK LNERFMMLGS LVPSNGKLDK VSILDGAIDY 480 LKELERRVEE LESVKEAIEL EARTKRLQQE ATERTSGNYI MNKVGKSRKP VISKRKASNL 540 EEIEAETNYC TLTECSSDDL TVTVINRNAL IELECPWTES VFCEIMEAVS KLNLDSHTVQ 600 SSNTDGTLTV KIRAKFKGSK VATPGMIRRA LQRVLRKY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 444 | 449 | ERKRRE |
2 | 445 | 450 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41315.1 | 1e-173 | bHLH family protein |