PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181227.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 704aa MW: 77802.3 Da PI: 6.8568

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.5	1.1e-08	449	486	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + XP_027181227.1 449 FEHflHPYPTDVDKHILARQTGLSRSQVSNWFINARVR 486 554459******************************88 PP
2	BELL	116	1.9e-37	312	381	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +elqk+kakLl++leeVd+rYk+y++q+++v++sFeavag g+a++Y +lA+ka+SrhFrcL+d i++qi XP_027181227.1 312 MELQKRKAKLLQMLEEVDRRYKHYCNQMKAVVASFEAVAGNGAAAVYSALASKAMSRHFRCLRDGIVGQI 381 79******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MPIPGGEEKT RAMVTTTGYC FSDPSNVNPS IQTHIVTQLQ SFESNPEIYN LTTGMEMIGF 60 PSKNLQPTSH DNNSVMWKEF FGKPSGNHHH HYQAGGASSS KTINEPSSAS DQFYQQDFSA 120 TGKPDFSTGI SDTASQESLM VTQDHHNQSS AAWHVNRSVL LGDPSLRVVF PCEGNERPSQ 180 GLSLSLGSSN NPSTIGLQSF ELKHQDDMRF APSTSRDGQF IGKSLNIQQQ QQMMEDGFLG 240 KAANLHHQGL FQIRSSKYLA PAQELLNEFC NLETKQTDRT SKLKLHKTSQ WQDQENASNP 300 SKMQSLYSLD LMELQKRKAK LLQMLEEVDR RYKHYCNQMK AVVASFEAVA GNGAAAVYSA 360 LASKAMSRHF RCLRDGIVGQ IKATKKALGE KDTAAPGTTR GETPRLRLLD QALRQQRAFQ 420 QMSMMESHPW RPQRGLPERA VSVLRAWLFE HFLHPYPTDV DKHILARQTG LSRSQVSNWF 480 INARVRLWKP MVEEMYTEET KEGENSGESL DGGPAKGGLD DHQNPHHQSR ADQDQKPTPD 540 QLVRIDSECL SSIINNPEKN DSKSSKSLHQ EDHNLQHIQH HSFSRASDSF GAVELDFSSY 600 NHHSAGALSY ENAHQTYAAG GSGSGSGSGG SGTGGGVSLT LGLQQHSGGG VSLAFSPASQ 660 NSLFYSREHM EDCPPVQYSL LDSEGQNLPY RNLMGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MPIPGGEEKT RAMVTTTGYC FSDPSNVNPS IQTHIVTQLQ SFESNPEIYN LTTGMEMIGF  60
PSKNLQPTSH DNNSVMWKEF FGKPSGNHHH HYQAGGASSS KTINEPSSAS DQFYQQDFSA  120
TGKPDFSTGI SDTASQESLM VTQDHHNQSS AAWHVNRSVL LGDPSLRVVF PCEGNERPSQ  180
GLSLSLGSSN NPSTIGLQSF ELKHQDDMRF APSTSRDGQF IGKSLNIQQQ QQMMEDGFLG  240
KAANLHHQGL FQIRSSKYLA PAQELLNEFC NLETKQTDRT SKLKLHKTSQ WQDQENASNP  300
SKMQSLYSLD LMELQKRKAK LLQMLEEVDR RYKHYCNQMK AVVASFEAVA GNGAAAVYSA  360
LASKAMSRHF RCLRDGIVGQ IKATKKALGE KDTAAPGTTR GETPRLRLLD QALRQQRAFQ  420
QMSMMESHPW RPQRGLPERA VSVLRAWLFE HFLHPYPTDV DKHILARQTG LSRSQVSNWF  480
INARVRLWKP MVEEMYTEET KEGENSGESL DGGPAKGGLD DHQNPHHQSR ADQDQKPTPD  540
QLVRIDSECL SSIINNPEKN DSKSSKSLHQ EDHNLQHIQH HSFSRASDSF GAVELDFSSY  600
NHHSAGALSY ENAHQTYAAG GSGSGSGSGG SGTGGGVSLT LGLQQHSGGG VSLAFSPASQ  660
NSLFYSREHM EDCPPVQYSL LDSEGQNLPY RNLMGAQLLH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-107	TALE family protein