PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027181214.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 402aa MW: 42374.6 Da PI: 7.8378

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027181214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.2	2.7e-21	298	360	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ e+++l +++ XP_027181214.1 298 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRAEVNRIRSEYDQLLAQN 360 89*********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MGSSEMDKSS KEAKEAKESK TPPQPSAPST GTPDWSGFQA YSPMPPHGFL ASSPQAHPYM 60 WGVQHLMPPY GTPPHPYVAM YPPGGIYAHP SIPPGSYPFS PFAMASPNGV AEASGNTPGN 120 MEVDGKPSEG KEKLPIKRSK GSLGSLNMIT GRNNEPGKTA GASANGAYSK SGESASDGSS 180 EGSDANSQNE SQMKSGQRQD SAETSQNGSA AHGSQNGGPN TPHSMVNSVP MVPISAPGAP 240 GGLSGPATNL NIGMDYWGSA ASPTVPAMRG KVPTAPVAGG MVTGGRDGVQ SQLWIQDERE 300 LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA SLRAEVNRIR SEYDQLLAQN 360 ASLKERLGEV PGPDDPRSSR NEQHAGNDAQ HSGQAEPLQR GQ

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MGSSEMDKSS KEAKEAKESK TPPQPSAPST GTPDWSGFQA YSPMPPHGFL ASSPQAHPYM  60
WGVQHLMPPY GTPPHPYVAM YPPGGIYAHP SIPPGSYPFS PFAMASPNGV AEASGNTPGN  120
MEVDGKPSEG KEKLPIKRSK GSLGSLNMIT GRNNEPGKTA GASANGAYSK SGESASDGSS  180
EGSDANSQNE SQMKSGQRQD SAETSQNGSA AHGSQNGGPN TPHSMVNSVP MVPISAPGAP  240
GGLSGPATNL NIGMDYWGSA ASPTVPAMRG KVPTAPVAGG MVTGGRDGVQ SQLWIQDERE  300
LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA SLRAEVNRIR SEYDQLLAQN  360
ASLKERLGEV PGPDDPRSSR NEQHAGNDAQ HSGQAEPLQR GQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	315	321	RRSRLRK
2	315	322	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-147	bZIP family protein