PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027180456.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 731aa MW: 83673.3 Da PI: 6.0244

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027180456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.7	1.4e-21	96	184	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY++Y+k vGF+vrk+++k+ +++ ++ r +vCs+eg++e++ + ++++ +++ +r+gC a+++vk ek +gk++v+ +++eHnHela XP_027180456.1 96 FYETYSKLVGFTVRKTYTKRD-KDNVVIYRGWVCSREGFPENRINIWDRRQVPKPGSRVGCLASFRVKHEKkSGKYVVSGFVKEHNHELA 184 9*************99998.5556999************9999999*************999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MDAAARSACE HANVDLSDNG NGVGDSSDDN RRNVEDNEIN IDAENINGSK SGGAEPHTEN 60 DTREVSWVEL DKGLDELTEK EVFKLKFDCD EEAGMFYETY SKLVGFTVRK TYTKRDKDNV 120 VIYRGWVCSR EGFPENRINI WDRRQVPKPG SRVGCLASFR VKHEKKSGKY VVSGFVKEHN 180 HELAAPIAVP YLQPQKRART VTVELGFTKK DIEHVQATSD IHDVDNRVLT HSVLAYLCAK 240 NDYDPGLFYK YDVDDEKQLF SIFWADSKSR ADYAFFGDVL ALNTKFRKNA YGKPFIILAG 300 LNNHCQTTVF GCALLGDETA ETYVWLLETF LDAMNHKAPV SVITDGDKAI EEAIEKIFPT 360 SQHRICHWHL YKDAVAIAGD SSFGPDFKKC MEENLNPDEF EVAWIKLMKK YGLQGHPWFE 420 EIYSRRTKWA EAYLREHFFA GLSSIQGHGM NTYFTRFLQV QLKLHEFVRY FDNALVHLRE 480 DEAKADSESE STCPAFCTIL RDLERHAADV FTKSIFLKVR EQIMGDAMLI LSNKEYLKDE 540 ACWVYRFSEY MKPDMIWKVR YHPTNQSLTC SCFKLIKDGL PCCHMISVIK AEQLREFPRC 600 CINKRWMKRA RSEIDSGIDI QALNMATEVA RFRILNSTCS EMNYYASQTL QGFNKARNLI 660 SKFTSDVKQI YNSKGEVDEP SPEVSEDADG STSRSGMHDP NGQCDASEVE RPRPDDCSLH 720 SHDQTTSQLR I

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MDAAARSACE HANVDLSDNG NGVGDSSDDN RRNVEDNEIN IDAENINGSK SGGAEPHTEN  60
DTREVSWVEL DKGLDELTEK EVFKLKFDCD EEAGMFYETY SKLVGFTVRK TYTKRDKDNV  120
VIYRGWVCSR EGFPENRINI WDRRQVPKPG SRVGCLASFR VKHEKKSGKY VVSGFVKEHN  180
HELAAPIAVP YLQPQKRART VTVELGFTKK DIEHVQATSD IHDVDNRVLT HSVLAYLCAK  240
NDYDPGLFYK YDVDDEKQLF SIFWADSKSR ADYAFFGDVL ALNTKFRKNA YGKPFIILAG  300
LNNHCQTTVF GCALLGDETA ETYVWLLETF LDAMNHKAPV SVITDGDKAI EEAIEKIFPT  360
SQHRICHWHL YKDAVAIAGD SSFGPDFKKC MEENLNPDEF EVAWIKLMKK YGLQGHPWFE  420
EIYSRRTKWA EAYLREHFFA GLSSIQGHGM NTYFTRFLQV QLKLHEFVRY FDNALVHLRE  480
DEAKADSESE STCPAFCTIL RDLERHAADV FTKSIFLKVR EQIMGDAMLI LSNKEYLKDE  540
ACWVYRFSEY MKPDMIWKVR YHPTNQSLTC SCFKLIKDGL PCCHMISVIK AEQLREFPRC  600
CINKRWMKRA RSEIDSGIDI QALNMATEVA RFRILNSTCS EMNYYASQTL QGFNKARNLI  660
SKFTSDVKQI YNSKGEVDEP SPEVSEDADG STSRSGMHDP NGQCDASEVE RPRPDDCSLH  720
SHDQTTSQLR I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-88	FAR1 family protein