PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bZIP | ||||||||
Protein Properties | Length: 234aa MW: 26601.7 Da PI: 6.1403 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.6e-11 | 121 | 178 | 4 | 61 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr+ +NRe+A+rsR RK++ +e+L++ v L N++L ++l + +++ +++ XP_027179696.1 121 ERKRRRMLSNRESAKRSRMRKQKHLENLRNQVSRLRIGNRELVNRLRVVTHHCQLVRT 178 46789999*************************************9999999986655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MLSADGLFGN PFPAFESGFP PWDCQEPPFV FPQHDDPILS PLEELRVEAQ EPVISNSGSE 60 SYTPPPLDPT GQAISISGSE NYDPTPLDSS SGSEEPNQNN KRPYSGSDDT TNPPVDSAAD 120 ERKRRRMLSN RESAKRSRMR KQKHLENLRN QVSRLRIGNR ELVNRLRVVT HHCQLVRTDN 180 DRLRSESVIL RQRLWDIRQV LLVRQLQQQL ATSAWPCNNL TPMNDETIPQ PLIT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 126 | RKRRR |
2 | 122 | 143 | RKRRRMLSNRESAKRSRMRKQK |
3 | 135 | 140 | KRSRMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37730.1 | 3e-29 | bZIP family protein |