PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179587.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 663aa MW: 75459.8 Da PI: 5.6294

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.2	2.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_027179587.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g +tdWvmheyrl XP_027179587.1 100 S-QARAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QARAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECET NSGLQDAYAL CRVFKKSLNI PKIGDHYGTA TASDRSSSID 180 PYSEGRCDDL ESFDYSMPSA TTINNFNYPM QSASCSSNII HGSPLNNINE GPSDSRWMQY 240 LSDEAFGFSN PSFPNHAAMS YPPSRVDIAL ECARLQHRFP LSPLEVQDFP QVGFADARMP 300 QLGYIHENPN QQDIVEEILS VAQASQDFMN EDAWGGNYAP ADDFSFLPPT NQIHDSSSFK 360 FIDKLREDCS FRSIDIGGMD EGLKSERMVE NLRWVGMSDK DLEKSFLEEF KTVPIESIST 420 FQREENQVPG ETVHQNDQNE AEKTDYSLGF NNDKGSDNFL TDGDVEDFSS TSNFEVYEKI 480 EVSHGMLIST RQTANTFYHQ LMPSKTVRVH LHPMIMHDFP VAKSDSRTVP KTGHFPAKFS 540 TFSSAISKSL KPWRKTVRTF ISMIAILNAY WIFYGEYLED KEPMDDPVML SNKASELIEG 600 DCTSKTMIKT IKVQDYELNC EKSRVSMVGK GGSISAVHNK IWTYLTLTLA LCTFWMHQIV 660 PSP

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QARAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECET NSGLQDAYAL CRVFKKSLNI PKIGDHYGTA TASDRSSSID  180
PYSEGRCDDL ESFDYSMPSA TTINNFNYPM QSASCSSNII HGSPLNNINE GPSDSRWMQY  240
LSDEAFGFSN PSFPNHAAMS YPPSRVDIAL ECARLQHRFP LSPLEVQDFP QVGFADARMP  300
QLGYIHENPN QQDIVEEILS VAQASQDFMN EDAWGGNYAP ADDFSFLPPT NQIHDSSSFK  360
FIDKLREDCS FRSIDIGGMD EGLKSERMVE NLRWVGMSDK DLEKSFLEEF KTVPIESIST  420
FQREENQVPG ETVHQNDQNE AEKTDYSLGF NNDKGSDNFL TDGDVEDFSS TSNFEVYEKI  480
EVSHGMLIST RQTANTFYHQ LMPSKTVRVH LHPMIMHDFP VAKSDSRTVP KTGHFPAKFS  540
TFSSAISKSL KPWRKTVRTF ISMIAILNAY WIFYGEYLED KEPMDDPVML SNKASELIEG  600
DCTSKTMIKT IKVQDYELNC EKSRVSMVGK GGSISAVHNK IWTYLTLTLA LCTFWMHQIV  660
PSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-158	NAC family protein