PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 366aa MW: 40088.5 Da PI: 8.7719 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.8 | 2.6e-33 | 126 | 180 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +vrY+eClkNhAas+Ggh vDGCgEfmps geegt++al+CaAC+CHRnFHR+e + XP_027179427.1 126 SVRYRECLKNHAASMGGHIVDGCGEFMPS-GEEGTPEALRCAACDCHRNFHRKEGD 180 79**************************9.999********************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MEPRGQEKDI GSLPYSMGYS PPSFTNESST KPPSAPTLDR RRIDAGRGSI IPITPSPNQT 60 LDQQQNPPQQ QLYAHKDSNP DPDPVQVTNA TPISGASNSK TATVAAQQPP PAAAASGANT 120 ITPGSSVRYR ECLKNHAASM GGHIVDGCGE FMPSGEEGTP EALRCAACDC HRNFHRKEGD 180 GEPQAGTSGY YTQNHTPRLH NSAHQATLFR TQPQTSPIRM PPQHHHHQQH HKFAHSYSHG 240 LTASPTGPMA PIMMTFGGNS GGAAAESSSE DLNMVQYNAG GQVVQQAFSV SRKRLRTKFT 300 QQQKDGMNEF AEKLGWKIQK QDEQEVQQFC SEVGVKRQVF KVWMHNNKQA MKKKQIEPVR 360 NTGQEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75240.1 | 4e-59 | ZF-HD family protein |