PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 492aa MW: 56509.6 Da PI: 8.8936 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.6 | 1.1e-13 | 25 | 99 | 15 | 98 |
-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +p +f+ ++ ggk ++ + +l+ ++W+v++ +++ +l++GW+ F+ +n+L++gDf vF+++g++ f v vf+ XP_027179406.1 25 GVKIPASFL-KYlGGKI-SENQAVLRRGGVKEWRVEI----SDQ--WLREGWRAFAVENNLQVGDFAVFEHEGNMVF--EVLVFD 99 578******.6645553.445799999999*******....443..5*************************99999..777776 PP | |||||||
2 | B3 | 55.3 | 1.2e-17 | 164 | 246 | 10 | 96 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +l +rl +p++fa e+g+ ++ ++l+d+s rsW++k+ + +s+ ++ GWk+F+ka+gLkegD +v++l+++ ++ +v+ + XP_027179406.1 164 NLLYHRLNIPRDFAMENGLF-GRECNIKLRDQSQRSWSLKI--KSSSDCASIQCGWKSFAKAQGLKEGDEFVLELTEN-GEAPVFNF 246 455689***********554.33458***************..8888889************************9875.44466665 PP | |||||||
3 | B3 | 58.4 | 1.3e-18 | 275 | 363 | 4 | 96 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++ ++ ++++l+lp kfa+++++++ +s +l+l+d++ rsW +l + +++r+ ++ G eF an+LkegD++ F+l++ +++++v+ + XP_027179406.1 275 STIEPHCIRRCILYLPMKFARSNDLSN-RSCKLILKDPKKRSWHAEL--NSRGSRVCISFGLDEFFTANDLKEGDTCSFELVE-NGETPVINF 363 567889999**************9885.677****************..999999*************************998.566677765 PP | |||||||
4 | B3 | 56.8 | 4e-18 | 387 | 475 | 4 | 96 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++++++ ks+ l lp kfa+ +g+ k ++ +++++d + r W++kl + +++r+vl++GW++ +angLk+gD F+ ++ +++++vv + XP_027179406.1 387 STIKPYNIKSCVLHLPVKFAKPNGLTKLKG-EMIVKDDRQRLWKIKL--KDRGDRVVLSRGWSNISRANGLKVGDRYKFEIIK-KGKRPVVNF 475 56799******************9998776.9***************..9999***************************998.777788865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence |
MSMRTRIQPE KPHFFKPILP GFIDGVKIPA SFLKYLGGKI SENQAVLRRG GVKEWRVEIS 60 DQWLREGWRA FAVENNLQVG DFAVFEHEGN MVFEVLVFDP SHCEREYASI DDETKCSKKF 120 KAAATEEIPR SKKVKLELSD DQEEPDSTDQ ICHPYFIFTV KPINLLYHRL NIPRDFAMEN 180 GLFGRECNIK LRDQSQRSWS LKIKSSSDCA SIQCGWKSFA KAQGLKEGDE FVLELTENGE 240 APVFNFYGKD KASTRKSGKE VSWRDEEPVN PHFTSTIEPH CIRRCILYLP MKFARSNDLS 300 NRSCKLILKD PKKRSWHAEL NSRGSRVCIS FGLDEFFTAN DLKEGDTCSF ELVENGETPV 360 INFLTRLTKD DQPPPQPATD DHSYFISTIK PYNIKSCVLH LPVKFAKPNG LTKLKGEMIV 420 KDDRQRLWKI KLKDRGDRVV LSRGWSNISR ANGLKVGDRY KFEIIKKGKR PVVNFHCKFL 480 KSEEDSPALT PN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24645.1 | 9e-53 | B3 family protein |