PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179405.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 517aa    MW: 59403 Da    PI: 8.8483
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.51.2e-1325991598
                    -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                     + +p +f+ ++ ggk  ++ + +l+    ++W+v++    +++  +l++GW+ F+ +n+L++gDf vF+++g++ f   v vf+
  XP_027179405.1 25 GVKIPASFL-KYlGGKI-SENQAVLRRGGVKEWRVEI----SDQ--WLREGWRAFAVENNLQVGDFAVFEHEGNMVF--EVLVFD 99
                    578******.6645553.445799999999*******....443..5*************************99999..777776 PP
2B355.21.3e-171612431096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +l  +rl +p++fa e+g+   ++  ++l+d+s rsW++k+  + +s+   ++ GWk+F+ka+gLkegD +v++l+++ ++ +v+ +
  XP_027179405.1 161 NLLYHRLNIPRDFAMENGLF-GRECNIKLRDQSQRSWSLKI--KSSSDCASIQCGWKSFAKAQGLKEGDEFVLELTEN-GEAPVFNF 243
                     455689***********554.33458***************..8888889************************9875.44466665 PP
3B350.53.8e-163133881796
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +lp kfa+++++++ +s +l+l+d++ rsW  +l  + +++r+ ++ G  eF  an+LkegD++ F+l++ +++++v+ +
  XP_027179405.1 313 YLPMKFARSNDLSN-RSCKLILKDPKKRSWHAEL--NSRGSRVCISFGLDEFFTANDLKEGDTCSFELVE-NGETPVINF 388
                     79********9885.677****************..999999*************************998.566677765 PP
4B356.74.4e-18412500496
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++++ ks+ l lp kfa+ +g+ k ++ +++++d + r W++kl  + +++r+vl++GW++  +angLk+gD   F+ ++ +++++vv +
  XP_027179405.1 412 STIKPYNIKSCVLHLPVKFAKPNGLTKLKG-EMIVKDDRQRLWKIKL--KDRGDRVVLSRGWSNISRANGLKVGDRYKFEIIK-KGKRPVVNF 500
                     56799******************9998776.9***************..9999***************************998.777788865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MSMRTRIQPE KPHFFKPILP GFIDGVKIPA SFLKYLGGKI SENQAVLRRG GVKEWRVEIS  60
DQWLREGWRA FAVENNLQVG DFAVFEHEGN MVFEVLVFDP SHCEREYASI DDETKCSKKF  120
KAAEIPRSKK VKLELSDDQE EPDSTDQICH PYFIFTVKPI NLLYHRLNIP RDFAMENGLF  180
GRECNIKLRD QSQRSWSLKI KSSSDCASIQ CGWKSFAKAQ GLKEGDEFVL ELTENGEAPV  240
FNFYGKDKAS TRKSGKEVSW RDEEPVNPHF TSTIEPHCIR RCILVSLFVS CHNPFLWHAI  300
HYSCNIPGNP MQYLPMKFAR SNDLSNRSCK LILKDPKKRS WHAELNSRGS RVCISFGLDE  360
FFTANDLKEG DTCSFELVEN GETPVINFLT RLTKDDQPPP QPATDDHSYF ISTIKPYNIK  420
SCVLHLPVKF AKPNGLTKLK GEMIVKDDRQ RLWKIKLKDR GDRVVLSRGW SNISRANGLK  480
VGDRYKFEII KKGKRPVVNF HCKFLKSEED SPALTPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.14e-49B3 family protein