PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179403.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 520aa    MW: 59704.3 Da    PI: 8.7534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.41.2e-1325991598
                    -EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                     + +p +f+ ++ ggk  ++ + +l+    ++W+v++    +++  +l++GW+ F+ +n+L++gDf vF+++g++ f   v vf+
  XP_027179403.1 25 GVKIPASFL-KYlGGKI-SENQAVLRRGGVKEWRVEI----SDQ--WLREGWRAFAVENNLQVGDFAVFEHEGNMVF--EVLVFD 99
                    578******.6645553.445799999999*******....443..5*************************99999..777776 PP
2B355.21.3e-171642461096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +l  +rl +p++fa e+g+   ++  ++l+d+s rsW++k+  + +s+   ++ GWk+F+ka+gLkegD +v++l+++ ++ +v+ +
  XP_027179403.1 164 NLLYHRLNIPRDFAMENGLF-GRECNIKLRDQSQRSWSLKI--KSSSDCASIQCGWKSFAKAQGLKEGDEFVLELTEN-GEAPVFNF 246
                     455689***********554.33458***************..8888889************************9875.44466665 PP
3B350.53.9e-163163911796
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +lp kfa+++++++ +s +l+l+d++ rsW  +l  + +++r+ ++ G  eF  an+LkegD++ F+l++ +++++v+ +
  XP_027179403.1 316 YLPMKFARSNDLSN-RSCKLILKDPKKRSWHAEL--NSRGSRVCISFGLDEFFTANDLKEGDTCSFELVE-NGETPVINF 391
                     79********9885.677****************..999999*************************998.566677765 PP
4B356.74.4e-18415503496
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++++ ks+ l lp kfa+ +g+ k ++ +++++d + r W++kl  + +++r+vl++GW++  +angLk+gD   F+ ++ +++++vv +
  XP_027179403.1 415 STIKPYNIKSCVLHLPVKFAKPNGLTKLKG-EMIVKDDRQRLWKIKL--KDRGDRVVLSRGWSNISRANGLKVGDRYKFEIIK-KGKRPVVNF 503
                     56799******************9998776.9***************..9999***************************998.777788865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MSMRTRIQPE KPHFFKPILP GFIDGVKIPA SFLKYLGGKI SENQAVLRRG GVKEWRVEIS  60
DQWLREGWRA FAVENNLQVG DFAVFEHEGN MVFEVLVFDP SHCEREYASI DDETKCSKKF  120
KAAATEEIPR SKKVKLELSD DQEEPDSTDQ ICHPYFIFTV KPINLLYHRL NIPRDFAMEN  180
GLFGRECNIK LRDQSQRSWS LKIKSSSDCA SIQCGWKSFA KAQGLKEGDE FVLELTENGE  240
APVFNFYGKD KASTRKSGKE VSWRDEEPVN PHFTSTIEPH CIRRCILVSL FVSCHNPFLW  300
HAIHYSCNIP GNPMQYLPMK FARSNDLSNR SCKLILKDPK KRSWHAELNS RGSRVCISFG  360
LDEFFTANDL KEGDTCSFEL VENGETPVIN FLTRLTKDDQ PPPQPATDDH SYFISTIKPY  420
NIKSCVLHLP VKFAKPNGLT KLKGEMIVKD DRQRLWKIKL KDRGDRVVLS RGWSNISRAN  480
GLKVGDRYKF EIIKKGKRPV VNFHCKFLKS EEDSPALTPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.12e-49B3 family protein