PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 353aa MW: 39649.3 Da PI: 6.7901 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.6 | 5.1e-09 | 188 | 235 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_027179268.1 188 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 235 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MLHCLQTPSP ENFTAAGMNA DMSVLERQRS VLQRLYQQQQ HQQDMHSSQP TTSSMPLFQY 60 QNLVNPLKVH QENSPNFGFT CSEITTTNTN LEMDHHQLSC SNVTATSSKT HHVASSKKRK 120 AEFDVEEECK DKRVEGEAGE VQSGITVKSE KENSGRNSRE NSNSKASEVV QKTDYIHVRA 180 RRGQATDSHS LAERARREKI SKKMKCLQDL VPGCNKVTGK AGMLDEIINY VQSLQKQVEF 240 LSMKLATLNP RLDFNVDNIF AKEFPAYIAS FPTAATPIEV VHSALLQYNQ GQQEPTSSGL 300 DMAINPAQMV PQRTGTSSLT FPEAYFDSIS SLSQMPTWDS DWQSFYNNVV SYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18300.2 | 4e-57 | bHLH family protein |