PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 25223.5 Da PI: 9.5417 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.7 | 1.5e-09 | 30 | 76 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT eE++l+ +a + + + +++Ia +++ g+t +q+k ++q + XP_027179040.1 30 EWTFEEEKLFENALAVYDLNswdLFEKIAIKVP-GKTIEQIKQHFQLL 76 7*******************6666689******.***********965 PP | |||||||
2 | Myb_DNA-binding | 47.1 | 5.7e-15 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT+eE+e ++ + k++G+g+W++I+r +++t+ q+ s+ qky XP_027179040.1 122 RWTKEEHENFLLGLKKYGKGDWRSISRNSVLTKTPTQVASHAQKY 166 9*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MELSNLSCYP FNEDAILSFT CSPVRSKDSE WTFEEEKLFE NALAVYDLNS WDLFEKIAIK 60 VPGKTIEQIK QHFQLLVEDV NFIETWSGPL PNCRTTNNVE PESTPNSTLT SVENRQKKKG 120 TRWTKEEHEN FLLGLKKYGK GDWRSISRNS VLTKTPTQVA SHAQKYFIRL AKLSTTSNPL 180 SSAASQGKSK IKMTPPSQRV AAYSSASIFY QSPTTATSII KRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 3e-45 | MYB family protein |