PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027178153.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 534aa MW: 62173.9 Da PI: 7.0803

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027178153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64	4.2e-20	70	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+ + + ++ f+C egkr ++k++ + +r+etr++C a++ ++ gk++v ++ eHnHel+ XP_027178153.1 70 NFYQKYAKVSGFGTRLSKGHKDKNGDIMLDKVFCCFHEGKRPKDKRN-MIVKCPRPETRCDCGARISCRQA--GKYRVVLFVAEHNHELS 156 6****************************************9999.99999*******9988877..*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MENDLSTHEI QSCRKLDFED VDLQEINDNA LPLCITDGNQ GNQIFLPLAI PDDMVPKLGM 60 EFDTEVAARN FYQKYAKVSG FGTRLSKGHK DKNGDIMLDK VFCCFHEGKR PKDKRNMIVK 120 CPRPETRCDC GARISCRQAG KYRVVLFVAE HNHELSTPSK THLFRSHRHM TMAHEAEIDM 180 VRSCGIAPKQ SIELMSKQVG GRENLGFIRD DLKNYLRSKR SIPMMQGDTG GVLEYLQRMQ 240 LEDPNFYYAI QVDEDDLITN IFWADAKMRT DFAHFGDVVC FDTTYRKHKD GRPIALFVGV 300 NHHKQTTVFG AALLYDETIG TFEWLFDTFA KAMMGKIPRT ILTDQDGRMA TALASQWPTT 360 YHRLCIWHIY QNAATHLANV FKDFHNFAAN FSHCIYDYEN ENDFLEGWSE MLKMYGLEDN 420 KWLKKMFDIK EKWALAYGRE TFCADMTTTQ RSEFMNSVIK KYVSYKHDLL EFFEHFQRLL 480 DDRRYDESIA DFRGKQSTKA VTFPCKILKH AASIYTHEVY EKFKDELCKR TDCK

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MENDLSTHEI QSCRKLDFED VDLQEINDNA LPLCITDGNQ GNQIFLPLAI PDDMVPKLGM  60
EFDTEVAARN FYQKYAKVSG FGTRLSKGHK DKNGDIMLDK VFCCFHEGKR PKDKRNMIVK  120
CPRPETRCDC GARISCRQAG KYRVVLFVAE HNHELSTPSK THLFRSHRHM TMAHEAEIDM  180
VRSCGIAPKQ SIELMSKQVG GRENLGFIRD DLKNYLRSKR SIPMMQGDTG GVLEYLQRMQ  240
LEDPNFYYAI QVDEDDLITN IFWADAKMRT DFAHFGDVVC FDTTYRKHKD GRPIALFVGV  300
NHHKQTTVFG AALLYDETIG TFEWLFDTFA KAMMGKIPRT ILTDQDGRMA TALASQWPTT  360
YHRLCIWHIY QNAATHLANV FKDFHNFAAN FSHCIYDYEN ENDFLEGWSE MLKMYGLEDN  420
KWLKKMFDIK EKWALAYGRE TFCADMTTTQ RSEFMNSVIK KYVSYKHDLL EFFEHFQRLL  480
DDRRYDESIA DFRGKQSTKA VTFPCKILKH AASIYTHEVY EKFKDELCKR TDCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein