PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177931.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 316aa    MW: 34655.8 Da    PI: 5.7126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09189237255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+++  ++rrRR ri ++ e L+ellP++     +   Ka++L   +++Ik+Lq
  XP_027177931.1 189 RQKAATADRRRRLRISEGVEALQELLPHP-----REGGKASVLDDIIDHIKYLQ 237
                     899999**********************8.....5677999************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MHLVVLIFRC FALRRSIFFL GLETMEDESN CNAFPFTTTT LAFGGRGSSS SNNHNVYYMQ  60
EEADHSHYLN FAAAAAASND TTPHHAPTTL PSWLCCQPTP QNYVHFLAEN GASQVHNEIL  120
PFNNSPGSSG FTTPEASFDM VGYKRPHTEG VPPSNLTVLG FQIPSQNSNE SYGTAATGSP  180
STVPSSTSRQ KAATADRRRR LRISEGVEAL QELLPHPREG GKASVLDDII DHIKYLQFQV  240
KELSQSRLGG ESSSTPFILL EGYGHFLLRD QMQNEPLEEM MGRLLEVNPL AATQLLESGG  300
LIVMPMSLAE GLRPQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.12e-21bHLH family protein