PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177189.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 865aa MW: 100061 Da PI: 7.8034

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	78	168	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY ++ +GFsvrks++ k ++g++ r++vCs++g r+e++ + ++++r+++a+tr++Cka++kv+++ ++k++v++++ HnH+la XP_027177189.1 78 FYVMLGRATGFSVRKSYKLKDPETGRVRYRQWVCSRHGLRDEKHIQrEDRQREPKAVTRVDCKACFKVRLSVeEDKYVVSNIVMRHNHKLA 168 9999**********************************99987756788899*************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence
MQSANDPNGK RPVQDSWKDL TMWDAIDEFE ISETEEGTQA MSVRGQLHEG VQDFNYEDLD 60 ERDVMSMKFN TENEAEAFYV MLGRATGFSV RKSYKLKDPE TGRVRYRQWV CSRHGLRDEK 120 HIQREDRQRE PKAVTRVDCK ACFKVRLSVE EDKYVVSNIV MRHNHKLASP TSTKFLKSHR 180 HISEADYAQA HVLRRVGMKT SQIMKLFVLQ CGGYNNVPFT IKDLYNKMNS ERMEEIADGD 240 AEGAFAYLFG KKDVDPNLYF NFTVDSEGRL SRLFWSDSRS REDYRCFGDV LVFDSTYNTN 300 KYLHPLVVMC GINNHFSTSI FACSTVREED EGAYEWVLNT FLEAMDGKKP ISVVTDGAPQ 360 MRKAIKKCLP NTKHRLCCWH LNQNLNSHVG NEDFRAGFKD CMYNNCSIDK FEAKWAKLVC 420 SFNMENNDWV NQVYRKRKRW ALAYLRGYFF GGMRSTQRCE RMHAMLKIYL HRELRLFETL 480 RAFDLANAWL RHEEARMNVE TEHTSLLPAT ETHYLEQHAA EVFTRRIFLK VRAEMRSQGL 540 YFRYNAMDDG VQCIHFISHS YSNKEWRVLY NRTSGIMSCS CLQMKTVGLP CSHMFRIMVI 600 EGMKKIPPNC IMQRWMRDAR RGRSGSLRER SEVTNVNEMA RYARLSSGCN TMCYYGAKTT 660 TGYTRLLNVI DIQTAEMKTL SLEESTATGS SSQAHRKGDA SGKVGIGDPH ANRPRGDQRT 720 KGKERHIRNK CGNCGGFMYI LTFCGSGREG HNKRTCPLHI ENPNDDLSHA LGMSPDIFEG 780 NTSAAWVRGG MNMHFNSDND WDQLDHQLHD VGVKQGLEPI HGFQQSVDTT NYTWLNNGNL 840 SNYQPVDDEE EEDIDLNRDI MYPAW

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence

MQSANDPNGK RPVQDSWKDL TMWDAIDEFE ISETEEGTQA MSVRGQLHEG VQDFNYEDLD  60
ERDVMSMKFN TENEAEAFYV MLGRATGFSV RKSYKLKDPE TGRVRYRQWV CSRHGLRDEK  120
HIQREDRQRE PKAVTRVDCK ACFKVRLSVE EDKYVVSNIV MRHNHKLASP TSTKFLKSHR  180
HISEADYAQA HVLRRVGMKT SQIMKLFVLQ CGGYNNVPFT IKDLYNKMNS ERMEEIADGD  240
AEGAFAYLFG KKDVDPNLYF NFTVDSEGRL SRLFWSDSRS REDYRCFGDV LVFDSTYNTN  300
KYLHPLVVMC GINNHFSTSI FACSTVREED EGAYEWVLNT FLEAMDGKKP ISVVTDGAPQ  360
MRKAIKKCLP NTKHRLCCWH LNQNLNSHVG NEDFRAGFKD CMYNNCSIDK FEAKWAKLVC  420
SFNMENNDWV NQVYRKRKRW ALAYLRGYFF GGMRSTQRCE RMHAMLKIYL HRELRLFETL  480
RAFDLANAWL RHEEARMNVE TEHTSLLPAT ETHYLEQHAA EVFTRRIFLK VRAEMRSQGL  540
YFRYNAMDDG VQCIHFISHS YSNKEWRVLY NRTSGIMSCS CLQMKTVGLP CSHMFRIMVI  600
EGMKKIPPNC IMQRWMRDAR RGRSGSLRER SEVTNVNEMA RYARLSSGCN TMCYYGAKTT  660
TGYTRLLNVI DIQTAEMKTL SLEESTATGS SSQAHRKGDA SGKVGIGDPH ANRPRGDQRT  720
KGKERHIRNK CGNCGGFMYI LTFCGSGREG HNKRTCPLHI ENPNDDLSHA LGMSPDIFEG  780
NTSAAWVRGG MNMHFNSDND WDQLDHQLHD VGVKQGLEPI HGFQQSVDTT NYTWLNNGNL  840
SNYQPVDDEE EEDIDLNRDI MYPAW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-87	FAR1 family protein