PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027176941.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 436aa MW: 49155.3 Da PI: 6.6693

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027176941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	1.9e-07	374	406	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_027176941.1 374 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 406 59*****************************87 PP
2	ELK	28.8	2.9e-10	327	348	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_027176941.1 327 ELKHELKQGYKEKIVDIREEIL 348 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MAYEDHHLSH SSQEEMALHH FHHFTTSTTT TDPHHHHHHH HPTASSVLRS SIHSPPDTPT 60 SAAVAGNPPP PPSWLLNSSI LRGPHHHPSQ QQPDAAATSN FLHQLQASND DVSHLDHSPT 120 AAMSMVHKRL KDNHANNNNG SDHQAPAVMV NDEWEKDKCK AEILNHPLYD QLLSAHVSCL 180 RIATPVDQLP RIDAQLAQSQ HVVAKYSSVL RGHDPHQQAL DDKDLDHFMT HYVLLLSSFK 240 EQLQQHVRVH AMEAVMACWE LEQSLQSLTG VAPSEGTGAT MSDDDDDQAD SDTNLFEGSL 300 DGQDSMGFGP LTPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT 360 TSLLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSSSQKS 420 KRKSSAGEKS SNEQFM

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MAYEDHHLSH SSQEEMALHH FHHFTTSTTT TDPHHHHHHH HPTASSVLRS SIHSPPDTPT  60
SAAVAGNPPP PPSWLLNSSI LRGPHHHPSQ QQPDAAATSN FLHQLQASND DVSHLDHSPT  120
AAMSMVHKRL KDNHANNNNG SDHQAPAVMV NDEWEKDKCK AEILNHPLYD QLLSAHVSCL  180
RIATPVDQLP RIDAQLAQSQ HVVAKYSSVL RGHDPHQQAL DDKDLDHFMT HYVLLLSSFK  240
EQLQQHVRVH AMEAVMACWE LEQSLQSLTG VAPSEGTGAT MSDDDDDQAD SDTNLFEGSL  300
DGQDSMGFGP LTPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK RRAGKLPGDT  360
TSLLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS NPSSSSSQKS  420
KRKSSAGEKS SNEQFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-154	TALE family protein