PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027176220.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 723aa MW: 78160.1 Da PI: 7.2764

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027176220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28	3.8e-09	418	455	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_027176220.1 418 FEHflHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVR 455 554459******************************88 PP
2	BELL	118.7	2.8e-38	282	353	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai +qi XP_027176220.1 282 ERQEIQMKKAKLVNMLDEVEQRYRQYHNQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAILGQI 353 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MATYFHGNSE IQGGGGDHGL QTLILMNHAG YVGGYSDTHQ PPPHVQVQVQ PPSNFVFLNS 60 SNTPGPSAAP GANSLNVPHA PPPPSPTQQF VGIPLTATAA TSSHDHQPHA ASVQDISALH 120 AFLPRLQYNL YSPAMDLGAA REVSRAQQGL SLSLSSQQPA YGSFRPEREI PSQPLVTAIS 180 PTGGDDVRVS GGSSSSASGI SNGVNGMQSV LLSSKYLKAA QELLDEVVNV GKGVKSGAAT 240 AKGANGQAKE IGESSEMTAT AGEGQNGREN SAKRSAELTT AERQEIQMKK AKLVNMLDEV 300 EQRYRQYHNQ MQIVISWFEQ AAGIGSAKTY TALALQTISK QFRCLKDAIL GQIRAASKSL 360 GEEDSFGGKI EGSRLKFVDN QLRQQRALQQ LGMIQHNAWR PQRGLPERSV SVLRAWLFEH 420 FLHPYPKDSD KLMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYTEEMK EHEKNGSEEK 480 TSKSEQNEDS GSKSNALQEK SSSLEIQNKG FISKQDHLAN QNVTSPISMS PTASPPGIHI 540 QNQSGFNLIG SPEMDSITQG SPKKLRSADM LHSPSSVPSV SIDAKPNESN NEQLSMKFVN 600 ERQNREGFSL LGAPTNFIGG FGSYPIAEIG RFSSDQFPGP YSGNGVSLTL GLPHCENLSI 660 SGHHQNFLPN QNIQLGRGVE IGEANDYGGL GTPTSSHSTS VYENINIQNR KRFAAQLLPD 720 FVA

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MATYFHGNSE IQGGGGDHGL QTLILMNHAG YVGGYSDTHQ PPPHVQVQVQ PPSNFVFLNS  60
SNTPGPSAAP GANSLNVPHA PPPPSPTQQF VGIPLTATAA TSSHDHQPHA ASVQDISALH  120
AFLPRLQYNL YSPAMDLGAA REVSRAQQGL SLSLSSQQPA YGSFRPEREI PSQPLVTAIS  180
PTGGDDVRVS GGSSSSASGI SNGVNGMQSV LLSSKYLKAA QELLDEVVNV GKGVKSGAAT  240
AKGANGQAKE IGESSEMTAT AGEGQNGREN SAKRSAELTT AERQEIQMKK AKLVNMLDEV  300
EQRYRQYHNQ MQIVISWFEQ AAGIGSAKTY TALALQTISK QFRCLKDAIL GQIRAASKSL  360
GEEDSFGGKI EGSRLKFVDN QLRQQRALQQ LGMIQHNAWR PQRGLPERSV SVLRAWLFEH  420
FLHPYPKDSD KLMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYTEEMK EHEKNGSEEK  480
TSKSEQNEDS GSKSNALQEK SSSLEIQNKG FISKQDHLAN QNVTSPISMS PTASPPGIHI  540
QNQSGFNLIG SPEMDSITQG SPKKLRSADM LHSPSSVPSV SIDAKPNESN NEQLSMKFVN  600
ERQNREGFSL LGAPTNFIGG FGSYPIAEIG RFSSDQFPGP YSGNGVSLTL GLPHCENLSI  660
SGHHQNFLPN QNIQLGRGVE IGEANDYGGL GTPTSSHSTS VYENINIQNR KRFAAQLLPD  720
FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-149	TALE family protein