PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027175292.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 472aa    MW: 51921.7 Da    PI: 8.9585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027175292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.3e-32194250360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geH h+k
  XP_027175292.1 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHSHPK 250
                     9***************************************.***************85 PP
2WRKY102.72.1e-32389446259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k ver+++dp+++ +tYeg+Hnhe
  XP_027175292.1 389 RDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKYVERTSDDPNAFMTTYEGKHNHE 446
                     7********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MEIKETEKVA IAKPVASRPT CSSFKSFSEL LAGAINASPS SSCSEAAVTA IRPRTVRFKP  60
AVDHPSAGVA ASQANLCGAA VSSPTAKDLK ADGKCKVVYK PMAKLVSKTT VSLLANMQSA  120
NLFQEQELAE VEANFQLPNL VKPQCDNRSE LHQNFLSAAQ KNKRVEPSNV TTQNLEEDQR  180
SLAHTANGDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI  240
VYKGEHSHPK TQPVRRNSSD GHWQGTSGNE SNNPLCRNQH SDKNECYEGT MENPNEFGFL  300
AHSSYSAGAP SCMHPTNGAS NFGVSNLDNS SCHSGEFDEG REGLEGETDG PKRKRRKNDN  360
QSNVAGTAAE GAQEPQVLGQ NSTDSEIIRD GFRWRKYGQK VVKGNPYPRS YYRCTSLKCN  420
VRKYVERTSD DPNAFMTTYE GKHNHEMPTK STSSLAAKTS TKALGTKKIY LD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1351358PKRKRRKN
2352357KRKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-109WRKY family protein