PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174763.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 160aa MW: 18616.4 Da PI: 8.9172

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	3.8e-21	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA e+ Fsvrk++ +k ++g it+r++ C k+g +++ +++ +rtr+ t++gC a++ + + + + k++v++l+le nHel XP_027174763.1 26 KFYNKYAFEMSFSVRKDYLNKD-KDGVITSRRYSCCKKGVKRKYESD-AMPKRTRTPTKIGCGAEMIIVLLRgTMKYRVHDLVLEYNHEL 113 6***************9998.8999*********9999988.89999*********9999888**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MDCSKLTEDK IPELGMEFNS EEDAYKFYNK YAFEMSFSVR KDYLNKDKDG VITSRRYSCC 60 KKGVKRKYES DAMPKRTRTP TKIGCGAEMI IVLLRGTMKY RVHDLVLEYN HELHITQCSH 120 MMLSQRKVSG VQGFQPEISK DARFSLKQSH ELMGKETDFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-15	FAR1 family protein