PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174711.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 372aa MW: 41646.4 Da PI: 9.2317

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.7	5.5e-33	66	119	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_027174711.1 66 PRLRWTPDLHRCFVQAVEKLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 119 8****************************************************7 PP
2	Myb_DNA-binding	52.7	9.8e-17	67	118	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_027174711.1 67 RLRWTPDLHRCFVQAVEKLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 118 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEEKGNFSDG LPEVNSSDHG MKDGGGSDDP KTSGSSSSNS MAEESTGKKL SSSATGVRQY 60 VRSKMPRLRW TPDLHRCFVQ AVEKLGGQER ATPKLVLQLM NVKGLSIAHV KSHLQMYRSK 120 NIDDHGQVIN ERGFPFRSMD HFLRNGWQFA TLDRGIRSSF SYSYSDDNWT SNMTWRAMPG 180 TVDDTNIKRG TVFHNTSLGR IYGGIGANAI NGSLFGTQER RKSYNYMEDF TWLPDTKINH 240 KGIWPSRGET NSELTQIYKE KRVESIVNAA SPETKCSGTK TEKANTAKRK APDNGVDLNL 300 SLSMNLRQGE SKRTHNWDEE EKDSTLSLSL FSASNAEKCS IDLNMSSTFN RLNEDTHKFK 360 NPMLASTLDL TI

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEEKGNFSDG LPEVNSSDHG MKDGGGSDDP KTSGSSSSNS MAEESTGKKL SSSATGVRQY  60
VRSKMPRLRW TPDLHRCFVQ AVEKLGGQER ATPKLVLQLM NVKGLSIAHV KSHLQMYRSK  120
NIDDHGQVIN ERGFPFRSMD HFLRNGWQFA TLDRGIRSSF SYSYSDDNWT SNMTWRAMPG  180
TVDDTNIKRG TVFHNTSLGR IYGGIGANAI NGSLFGTQER RKSYNYMEDF TWLPDTKINH  240
KGIWPSRGET NSELTQIYKE KRVESIVNAA SPETKCSGTK TEKANTAKRK APDNGVDLNL  300
SLSMNLRQGE SKRTHNWDEE EKDSTLSLSL FSASNAEKCS IDLNMSSTFN RLNEDTHKFK  360
NPMLASTLDL TI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-38	G2-like family protein