PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027174331.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 560aa MW: 65092.8 Da PI: 6.236 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.2 | 1.4e-23 | 70 | 158 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+++ + +r f+Cs+e k+ ++k++ + +r+etr++C a++k++ ++ +k++v +++ eHnHel+ XP_027174331.1 70 NFYQKYAKASGFGTRLSKGHKDKNSDLMLDRVFCCSREEKKPKDKRN-MIVKCPRPETRCDCSARMKISCRQGEKYRVVQFVAEHNHELS 158 6***************************************9999999.99999***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MENDLPTHEV QSCRKLDFED VDLQEINDNA LPLCITDGNR GNQIFLPLAI PDDLVPKLDM 60 EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR VFCCSREEKK PKDKRNMIVK 120 CPRPETRCDC SARMKISCRQ GEKYRVVQFV AEHNHELSTP SKTHLFRSHR HLTMAHEAEI 180 DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQGD TGGVLEYLQG 240 MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMGKIP RTILTDQDGR MATALASQWP 360 TTYHRLCIWH IYQNAATHLA DVFKDFQNFA TDFSHCIYDY ENEDDFFEGW SEMLKTYGLE 420 DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHG LLEFFEHFQR 480 LLDDRRYNES VADFKGNQST PAMTFSCRIL QHAASVYTHE VYENFKEELC KGIDCKWEVD 540 GDLGNQMSYR VTPHEMDKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-111 | FAR1 family protein |