PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027174268.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 322aa    MW: 37137.6 Da    PI: 7.1714
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027174268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind27.29.9e-094380239
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
    HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39
                    Fl+k+++++ed e++++isw+++g+s++vld+ +fa +
  XP_027174268.1 43 FLMKTFQMVEDTETNNMISWNSEGTSLIVLDHLKFAAE 80
                    9********************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEVRGGGIAG NSGIVRPYSL PSKQASEKME FMKGVRGFTP PPFLMKTFQM VEDTETNNMI  60
SWNSEGTSLI VLDHLKFAAE GFRKIGLRQY EYENKWFQRG QEHLLINIRR RNDEDPTIRK  120
RRGLRKQHIM AVRPSMEAEL EIFEDHMNAL KEDITRSKYH MGKLESSIAT FKKNVKRMEA  180
KLKALIKVFA RIFSPALVEK IIQRVEEEPE LEILQTMKRR RVILPQSSKT TTKSMDDGAC  240
GMDQDDQEAN TSMAESKKSA DQKLWKKFMG DDSVSEDESE QQLLKQHSRI DMGFDDLMVS  300
KIVNAKEPNL DVEDEVAVDL WT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218222KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.16e-21HSF family protein