PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174254.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 684aa MW: 80202.4 Da PI: 8.3332

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.8	9.9e-25	73	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Y +YAk vGF vrksks++ + g+ + rtf+Cs egkr ++k++ + + +r+etr+gC a++kv+ +++gk++v++++ eHnH l+ XP_027174254.1 73 QYYLAYAKLVGFGVRKSKSHND-KYGKLIARTFCCSAEGKRGKDKRD-GSVKAPRPETRCGCLARMKVNSRQTGKFRVIEFVVEHNHYLS 160 69*************99888.6777*************999.999**********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MGSKPSPCRQ LHFEEFKEQE EDFDIVNEGS IHDIEETSGL NSVKDLNKIH SSIPNETIPH 60 IGMEFETEDQ AWQYYLAYAK LVGFGVRKSK SHNDKYGKLI ARTFCCSAEG KRGKDKRDGS 120 VKAPRPETRC GCLARMKVNS RQTGKFRVIE FVVEHNHYLS SPNKTHLYRS HRSITSNLAV 180 DIEMAHNVGI APKVAHALMA RQAGGRENVG FIPEDYKNYL RSKRTRDVKI GDTGGVLEYL 240 QKMQFEDPNF FYAIQVDEDD LITNIFWSDG KMKANYANFG DVICFDTTYR KNKEGRPIAL 300 FVGVNHHKQT TIFGAALLYD ETSMTFEWLF DTFTRAMSGK KPMTILTDQD AAMAKALASK 360 WPDTHHRLCI WHIYQNAAIH LSSVFTEFKS FAHDFSTCIY DFEEEEDFVA EWNRMLEKYD 420 LQNNDWLKRL FRIKEKWALV YGRQYFCADM TTTQRSESMN SVLKRYVNYK HNFLEFFNHF 480 QRLLEDRRYE ELKADFRANI SFLALQYPCE LLKHAANIYT PEAFKCFQTE WCKSLDAKFH 540 DCGEVESVRK YEITLFKKGY YHTVFHDLLN DKFDCSCRKF QFTGIFCSHI LKVFMMRNIV 600 KIPSEYILKR WTRKAKTGFF GDEDSTVDTN NLDPKLVSSM RYRELCRIYV QLATRAAETE 660 ETYKIAKDSL LKCLKRWMQN YRMK

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MGSKPSPCRQ LHFEEFKEQE EDFDIVNEGS IHDIEETSGL NSVKDLNKIH SSIPNETIPH  60
IGMEFETEDQ AWQYYLAYAK LVGFGVRKSK SHNDKYGKLI ARTFCCSAEG KRGKDKRDGS  120
VKAPRPETRC GCLARMKVNS RQTGKFRVIE FVVEHNHYLS SPNKTHLYRS HRSITSNLAV  180
DIEMAHNVGI APKVAHALMA RQAGGRENVG FIPEDYKNYL RSKRTRDVKI GDTGGVLEYL  240
QKMQFEDPNF FYAIQVDEDD LITNIFWSDG KMKANYANFG DVICFDTTYR KNKEGRPIAL  300
FVGVNHHKQT TIFGAALLYD ETSMTFEWLF DTFTRAMSGK KPMTILTDQD AAMAKALASK  360
WPDTHHRLCI WHIYQNAAIH LSSVFTEFKS FAHDFSTCIY DFEEEEDFVA EWNRMLEKYD  420
LQNNDWLKRL FRIKEKWALV YGRQYFCADM TTTQRSESMN SVLKRYVNYK HNFLEFFNHF  480
QRLLEDRRYE ELKADFRANI SFLALQYPCE LLKHAANIYT PEAFKCFQTE WCKSLDAKFH  540
DCGEVESVRK YEITLFKKGY YHTVFHDLLN DKFDCSCRKF QFTGIFCSHI LKVFMMRNIV  600
KIPSEYILKR WTRKAKTGFF GDEDSTVDTN NLDPKLVSSM RYRELCRIYV QLATRAAETE  660
ETYKIAKDSL LKCLKRWMQN YRMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-137	FAR1 family protein