PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027173882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRF | ||||||||
Protein Properties | Length: 425aa MW: 46329.9 Da PI: 7.1873 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 82.3 | 4.3e-26 | 173 | 216 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_027173882.1 173 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 216 79***************************************987 PP | |||||||
2 | QLQ | 43.1 | 1.3e-15 | 95 | 127 | 2 | 34 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +F+ aQ+q+L+ Q+l++++++a++ vPpeLl + XP_027173882.1 95 YFSLAQWQELELQALIFRHMLAGAAVPPELLHH 127 7*****************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MDFNLKQWRE HHQGESDQEH TTPCAKIPRL HLDYSVYPQH QPPSGDSSAL PLFVTEPTSI 60 SKLSSNLSAP YPNPTDSTPT PTKYPGEAGG MGSYYFSLAQ WQELELQALI FRHMLAGAAV 120 PPELLHHLVK KTLLNSSHHH HPYYAPHHHR HHYPPHFQSA LLQSGYWGRA SMDPEPGRCR 180 RTDGKKWRCS RDVVAGQKYC ERHMHRGRNR SRKPVEIPTT RTATPGNGGA NVCGGILKNS 240 SFLVAQSLGS AMAAGGSVAG DTPHSAISGS SPSIDILHLS QRSSESIVRS QDDVHGDDTR 300 SSGQILRHFF DDWPRSLQES DDGGSNGTSA TTNLSISVSG NPTTSDFSLK LSTGDGDDTT 360 DAENVEWERS QSNWGVTGTW GANQVAPMGG PLAEALRSST SNSSPTSVLH QLQRRSASET 420 SYVST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 3e-58 | GRF family protein |