PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027173848.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family MYB_related
Protein Properties Length: 307aa    MW: 33422.8 Da    PI: 9.8475
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027173848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding391.8e-1296141247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++W++eE+  ++ + ++lG+g+Wk I++ +   Rt+ q+ s+ qky
   XP_027173848.1  96 KPWSEEEHRSFLLGLEKLGKGDWKGISKNFVHSRTPTQVASHAQKY 141
                      58*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MVKASLRKCS HCGHNGNCSR TCNGKGIKLF GVKINVVEDD YANRQNESIR KSKSMGNLET  60
CNGECNVPDD ADGYVSDGLI HESSGAKTAH ERRKGKPWSE EEHRSFLLGL EKLGKGDWKG  120
ISKNFVHSRT PTQVASHAQK YFLRLMTATE RKKRRSSVFD IPLDEMASTS KLPSASNSHD  180
APISPQATTA AQVKTCERPP LSPRATSHAV SDLHRPRYMF GVRDHGQGLP ACTPPPNVSF  240
LPIWNFSNQK FAPSPTTAAK YTRGPAVAQP PSAAFSRFPS YIPPLTGPAN EAAIKDGLDL  300
GVQALTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-58MYB_related family protein