PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027173693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 329aa MW: 35832.1 Da PI: 9.9093 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 94.1 | 1.7e-29 | 163 | 217 | 3 | 58 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p++VN KQy++Il+RRq Rak+e e+k+ k+rkpylh SRh hA+rRpRg+gGrF XP_027173693.1 163 PIFVNVKQYNGILRRRQYRAKAELENKV-LKNRKPYLHLSRHLHAMRRPRGCGGRF 217 9***************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MAMHGGLFAK EANTTSAFSA VPWWSTGLGS QPAGFHDDLF GQFKPASSAV DKPSNTGTQL 60 TPSREPERNG GQETGNGKTN KFTIFSGECK DPPNGQKFRL QNASNMQAAA AEYRGHLELG 120 FSQPLICAKY PYGEQCHGVF STYGPQLTGR IMLPLNSTSD EVPIFVNVKQ YNGILRRRQY 180 RAKAELENKV LKNRKPYLHL SRHLHAMRRP RGCGGRFLNT KNLNGSKSNT DDNTTAKGRF 240 SRPTGSQSSD VLQSDSGNSS SLRKANGCRS NNLGTEVTSV YSGGDLDCFP FNNLSSAIQS 300 LPNMMTSGHW IVPPGKWVVA ADSCCNLKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05690.1 | 1e-50 | NF-YA family protein |