PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027173688.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 309aa    MW: 34906.5 Da    PI: 7.8963
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027173688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.83.8e-48121372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     ppG+rFhP+deel+v+yL++kv++++l++  v+ e+++y+++PwdLpkk+  +e+ewyfFs+rd+ky++g ++nr+++sgyW+atg+dk++ls++
  XP_027173688.1  12 PPGVRFHPSDEELIVYYLHNKVNSRPLPA-AVVGEIELYSYNPWDLPKKALFGEEEWYFFSPRDRKYPNGAQPNRTAASGYWRATGTDKPILSSS 105
                     9****************************.89***************8888899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     g+ +g+kk+Lvfy g+  +g+ktdW+m eyrl
  XP_027173688.1 106 GARIGIKKSLVFYIGKPLNGVKTDWIMIEYRL 137
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
METQPISSFQ FPPGVRFHPS DEELIVYYLH NKVNSRPLPA AVVGEIELYS YNPWDLPKKA  60
LFGEEEWYFF SPRDRKYPNG AQPNRTAASG YWRATGTDKP ILSSSGARIG IKKSLVFYIG  120
KPLNGVKTDW IMIEYRLPDT HKRPSRSKGS MRLDDWVLCR IRQKGTMSKN SWEVPQSPNT  180
VMEDTPNLKE LPPAYPANNA SDICSTYFLS KDCHLLAKLL ATQDLPPIET NTRATSHGGN  240
KSQNCETVYE HGIIKENQVA NSFFPSSLNQ QGKPIEEIGY GSIPPSEKAM TNLHEFFLAG  300
NMDCTSFYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-72NAC family protein