PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027173676.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 345aa MW: 38908.2 Da PI: 9.0366

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027173676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.2	1.4e-48	12	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 ppG+rF P+deel+v+yL++kv++++l++ v+ e+++y+++PwdLpkk+ +e+ewyfFs+rd+ky++g r+nr+++sgyWkatg+dk++ls + XP_027173676.1 12 PPGVRFYPSDEELIVYYLHNKVNSRPLPA-AVVGEIELYSYNPWDLPKKALFGEEEWYFFSPRDRKYPNGARPNRTAASGYWKATGTDKPILSCS 105 9**************************.89***********8888899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+ +g+kk Lvfy g+ p+g+ktdW+m eyrl XP_027173676.1 106 GARIGVKKALVFYIGKPPNGVKTDWIMIEYRL 137 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
METQPISSFQ FPPGVRFYPS DEELIVYYLH NKVNSRPLPA AVVGEIELYS YNPWDLPKKA 60 LFGEEEWYFF SPRDRKYPNG ARPNRTAASG YWKATGTDKP ILSCSGARIG VKKALVFYIG 120 KPPNGVKTDW IMIEYRLPDT HKRPSRSKGS MRLDDWVLCR IRQKGNMSKN SWEVPHSPIK 180 VTEDTPNLKE LHSAYAAKNA LDICSSYFLS KDCHLLAKLL ATQDLPRIET NTRATSCSSN 240 ISQNCKTVYE HGTIKENQVT NSFFPSSLNQ QGKPIEEIGY GNIPPSEKAM TNLNKNEFFL 300 AGNVNGASFY NQQQSHGDMF KLNLSSAMMT LQELDVSAFA AKLLP

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

METQPISSFQ FPPGVRFYPS DEELIVYYLH NKVNSRPLPA AVVGEIELYS YNPWDLPKKA  60
LFGEEEWYFF SPRDRKYPNG ARPNRTAASG YWKATGTDKP ILSCSGARIG VKKALVFYIG  120
KPPNGVKTDW IMIEYRLPDT HKRPSRSKGS MRLDDWVLCR IRQKGNMSKN SWEVPHSPIK  180
VTEDTPNLKE LHSAYAAKNA LDICSSYFLS KDCHLLAKLL ATQDLPRIET NTRATSCSSN  240
ISQNCKTVYE HGTIKENQVT NSFFPSSLNQ QGKPIEEIGY GNIPPSEKAM TNLNKNEFFL  300
AGNVNGASFY NQQQSHGDMF KLNLSSAMMT LQELDVSAFA AKLLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	3e-76	NAC family protein