PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027173492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 309aa MW: 34446.1 Da PI: 4.3921 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.8 | 1e-09 | 127 | 169 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR r+++++ Lr+++P+ +K++Ka+i Av Y+++Lq XP_027173492.1 127 SERKRRGRMKEKLYALRSVVPNI-----TKMDKASIIGDAVLYVQELQ 169 6*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MEGTADILGL GMGNINDFGF IDFMDVTNFE QFIELVRGET AEPAVEFCAD FDCDHIAGCI 60 GGESQFVQPP EDQLFDFNIT SLSEFNLVPE QTKVAEEEND GEEESSATAT TPTNGSKKTD 120 RSRTLVSERK RRGRMKEKLY ALRSVVPNIT KMDKASIIGD AVLYVQELQM QAKKLKAEIA 180 GLESSLSQPN NYPGESFLNA KKPNFTINLP LIKKIFQMEV FPVEEREFYV RMVCNKGQGI 240 ATLLYKALES LAGFIVHSSN LAAAAETYIF TFTLNVNEFE VEIHLPNLKL WIASAFLNQG 300 FDFVTLPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 7e-87 | bHLH family protein |