PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027172893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 24596.9 Da PI: 6.3631 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.6 | 1.6e-06 | 12 | 61 | 2 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkas.kapskKlsKaeiLekAveYIks 53 +++ ++ E++RRd++++ ++L +llP++ k+ + e A+ +Iks XP_027172893.1 12 KTKRKITEKNRRDQMKNLCNKLYRLLPSDIsKGL---CPQPDKIEDAIYHIKS 61 567899**********************743333...3333333455555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
METFHASASN TKTKRKITEK NRRDQMKNLC NKLYRLLPSD ISKGLCPQPD KIEDAIYHIK 60 SMEKKLEDYQ EIKKKLLHGK RPCSSASSES NNSSTLTDVE VQDIGPDANM ILISGLEEQA 120 SFYGIIRRLH AEGFEVVTAN FSNTGTSTLQ VVHEKVGAST SGSETTAVSK RLKELIYGYP 180 QGEVESKLDL LDFEIVPDLL TSDFFGPFAT EKFCFLQQY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | EKNRRDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-13 | bHLH family protein |