PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027172731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 356aa MW: 39794.9 Da PI: 4.9761 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.8 | 2.4e-13 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed +l+ +++ G +W++ ++ g+ R++k+c++rw +yl XP_027172731.1 16 KGPWSPAEDYRLISFIQKQGHANWRALPKQAGLLRCGKSCRLRWINYL 63 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.2e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_027172731.1 69 RGNFTPEEEQTIINLHNALGNK-WSKIASHLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MGRGRAPCCD KSKVKKGPWS PAEDYRLISF IQKQGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTPEEEQTI INLHNALGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLVL 120 GNDDANCHQK IETSNSFTSY SASPSPSSSS CISYGDLNTE KGPGGDQEGL HSKVDEQQEP 180 CTSPTHPNAP NLENFSQPAE ETCSLDSCIK SKASPEVRKT TTDEPKEMAQ DGNIMEIPLE 240 PDADFWNFLD GLDPMDKSTE SQPQQEYGVS QSSNSGENHQ EEVHEYKRWL RYLENELGLV 300 GGNDGECPQK GAGAEQQQQQ LVTDTSDDEM MSRPEFDPAA MAYFSMWPSS PQNFGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 6e-79 | MYB family protein |